Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC134882.1-201ENST00000603738 1676 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 XRCC6P5-201ENST00000435236 1795 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 RNU6-1127P-201ENST00000384580 107 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 Y_RNA.576-201ENST00000384781 102 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 RPL23AP4-201ENST00000427757 463 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC097713.2-201ENST00000430199 356 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AL389925.1-201ENST00000432257 728 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 OR4C10P-201ENST00000434991 931 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC005840.2-201ENST00000447193 355 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC108059.3-201ENST00000456388 214 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MTCO3P2-201ENST00000457365 171 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 RNU7-27P-201ENST00000459281 62 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AL590326.1-201ENST00000460857 334 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 UBA52P3-201ENST00000491303 382 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC104806.1-201ENST00000508720 308 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 TBCAP3-201ENST00000512475 312 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC093816.1-201ENST00000515076 913 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 SNORA14.1-201ENST00000516113 141 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 STX3-204ENST00000530221 534 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC024405.2-202ENST00000532731 184 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 DYNLL1P4-201ENST00000549314 266 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC092718.4-201ENST00000566639 716 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MIR4271-201ENST00000582451 67 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MIR7109-201ENST00000613748 65 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MIR7973-1-201ENST00000614683 76 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MIR6861-201ENST00000618657 64 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 Z97832.2-201ENST00000605896 4261 ntBASIC7.42□□□□□ -1.22
LHX6Q9UPM6 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LHX6Q9UPM6 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC005538.2-201ENST00000623215 1864 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RNU6-28P-201ENST00000362378 107 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RNU6-511P-201ENST00000363496 107 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RN7SKP118-201ENST00000364331 330 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RNU6-959P-201ENST00000384671 107 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 U3.20-201ENST00000390909 217 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AL034374.1-201ENST00000406329 351 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 PPIAP30-201ENST00000415473 519 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AL445305.1-201ENST00000432577 575 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC108734.1-201ENST00000439549 399 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 OR2AQ1P-201ENST00000451972 200 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 UOX-201ENST00000471089 899 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC098869.1-201ENST00000481627 292 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RN7SL101P-201ENST00000496350 279 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC109481.1-201ENST00000509173 282 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC096745.1-201ENST00000509945 370 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 RNU7-4P-201ENST00000516961 62 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 MRPS36P4-201ENST00000534436 298 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC026371.1-201ENST00000551867 419 ntBASIC7.41□□□□□ -1.22
LHX6Q9UPM6 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.41□□□□□ -1.22
LHX6Q9UPM6 AC044860.3-201ENST00000559957 368 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms