Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 UBE2V1P12-201ENST00000503954 474 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC098799.3-201ENST00000506095 438 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC079075.1-201ENST00000559543 878 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC209154.1-201ENST00000582156 337 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RN7SL52P-201ENST00000584271 284 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC068790.4-201ENST00000602474 263 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AL133338.2-201ENST00000604292 736 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 AC008759.3-201ENST00000613300 508 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RN7SL722P-201ENST00000617780 284 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RN7SL565P-201ENST00000618246 284 ntBASIC4.95□□□□□ -1.62
SIX4Q9UIU6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SIX4Q9UIU6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC125257.1-201ENST00000560400 2930 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 RPL22P22-201ENST00000395439 379 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 RPS3AP23-201ENST00000401762 784 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC106883.1-201ENST00000418805 562 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 RPL36AP10-201ENST00000421785 322 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 VN1R42P-201ENST00000424651 344 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 RPL21P43-201ENST00000425440 472 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 BX119904.1-201ENST00000432026 348 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 MTCYBP21-201ENST00000443300 1113 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 RPL7P55-201ENST00000450522 746 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL935212.3-201ENST00000450729 284 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC002553.2-201ENST00000453217 340 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 NDUFA12P1-201ENST00000455914 406 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC026407.1-201ENST00000518369 204 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 CIR1P1-201ENST00000524055 1133 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 CR383656.6-201ENST00000550518 394 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 BMS1P7-201ENST00000602440 1052 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC005034.4-201ENST00000603612 899 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC079880.2-201ENST00000603790 1213 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC112503.1-201ENST00000608436 391 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 MIR6748-201ENST00000610433 71 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC100847.1-201ENST00000611316 481 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 MIR8069-1-201ENST00000616627 86 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 MIR8069-2-201ENST00000621412 86 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 AL359715.4-201ENST00000606629 1436 ntBASIC4.94□□□□□ -1.62
SIX4Q9UIU6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SIX4Q9UIU6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX4Q9UIU6 AC010132.2-201ENST00000295493 1043 ntBASIC4.93□□□□□ -1.62
SIX4Q9UIU6 RN7SKP115-201ENST00000363177 317 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms