Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL37P1-201ENST00000432310 284 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 snoU13.24-201ENST00000458998 104 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 AC110792.1-201ENST00000491826 472 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 SNORA74D-201ENST00000516404 141 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 RN7SL339P-201ENST00000580597 296 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 AC008759.1-201ENST00000589783 983 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 AL138721.1-201ENST00000616756 179 ntBASIC5.33□□□□□ -1.56
SCN11AQ9UI33 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN11AQ9UI33 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 RNU6-213P-201ENST00000384051 104 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 HMGB3P19-201ENST00000403971 560 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 GOT2P5-201ENST00000433995 546 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC007389.2-201ENST00000434630 306 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 RAD23BP3-201ENST00000454157 1152 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 HPRT1P2-201ENST00000505250 544 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AL160281.1-201ENST00000605307 311 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 BNIP3P19-201ENST00000605397 577 ntBASIC5.32□□□□□ -1.56
SCN11AQ9UI33 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN11AQ9UI33 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 EIF3EP2-201ENST00000423042 1814 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 OR4A15-201ENST00000314706 1035 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AC067945.1-201ENST00000342609 618 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AC114814.2-201ENST00000419195 485 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 NANOGP10-201ENST00000453325 895 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 SNORA59A-201ENST00000459326 152 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 RPS4XP15-201ENST00000489210 795 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AC010460.1-201ENST00000507087 466 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 MIR7702-201ENST00000621931 59 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 AL672167.1-205ENST00000641112 3080 ntBASIC5.31□□□□□ -1.56
SCN11AQ9UI33 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN11AQ9UI33 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 CYCSP10-201ENST00000417973 294 ntBASIC5.3□□□□□ -1.56
SCN11AQ9UI33 RPL29P14-201ENST00000495837 428 ntBASIC5.3□□□□□ -1.56
SCN11AQ9UI33 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SCN11AQ9UI33 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 RPS23P10-201ENST00000416185 486 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SCN11AQ9UI33 FCF1P7-201ENST00000451185 558 ntBASIC5.29□□□□□ -1.56
SCN11AQ9UI33 AC108022.1-201ENST00000493466 478 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms