Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AL731537.2-201ENST00000561565 951 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC005191.1-201ENST00000603950 358 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC010201.1-201ENST00000605051 540 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AL356218.2-201ENST00000605264 187 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC090948.1-201ENST00000607464 549 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC097505.1-201ENST00000610199 565 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC005086.4-201ENST00000623065 213 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC025031.4-201ENST00000621248 3271 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC009501.3-201ENST00000605001 1352 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.51□□□□□ -1.69
LHX3Q9UBR4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LHX3Q9UBR4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AL359715.4-201ENST00000606629 1436 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 A2MP1-204ENST00000566278 4130 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RNA5SP443-201ENST00000363083 132 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 Z86062.1-201ENST00000406773 777 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPL12P34-201ENST00000424532 479 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CDY14P-201ENST00000431260 1014 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPL34P6-201ENST00000432390 345 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CDY12P-201ENST00000440679 1015 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPS15AP29-201ENST00000445539 400 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CDY13P-201ENST00000445813 1015 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CDY23P-201ENST00000451661 1014 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 Z95152.1-201ENST00000453556 656 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPL10P17-201ENST00000453852 316 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 OR9N1P-202ENST00000494289 481 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC015795.1-201ENST00000513669 327 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC034205.1-201ENST00000520621 638 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 GSTP1P1-201ENST00000548078 319 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC084759.1-201ENST00000561168 290 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 MIR4277-201ENST00000578298 84 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 SS18L2P2-201ENST00000583960 235 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPL7P50-201ENST00000600588 727 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 AC010435.1-201ENST00000623353 1177 ntBASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.5□□□□□ -1.69
LHX3Q9UBR4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 CASC19-204ENST00000641001 2055 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 MIR141-201ENST00000384975 95 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 MIR320B1-201ENST00000390209 79 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 AC233289.1-201ENST00000403700 508 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 RN7SKP167-201ENST00000411047 285 ntBASIC4.49□□□□□ -1.69
LHX3Q9UBR4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.49□□□□□ -1.69
LHX3Q9UBR4 AC062016.2-201ENST00000420950 676 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms