Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC140479.2-201ENST00000421567 3130 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC015799.1-201ENST00000622996 3122 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 Y_RNA.356-201ENST00000365475 113 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 U8.14-201ENST00000390843 143 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 RNU6-332P-201ENST00000391193 108 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 RN7SKP30-201ENST00000411373 334 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 MICG-208ENST00000416822 132 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 RBMY2JP-201ENST00000425544 1059 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC073335.1-201ENST00000427776 363 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 ATP5HP2-201ENST00000433885 485 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 RPL3P11-201ENST00000434028 1146 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 ATP5LP4-201ENST00000434169 307 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 PHBP4-201ENST00000437447 837 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 GAPDHP23-201ENST00000444823 993 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC023598.1-201ENST00000472521 361 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 RN7SL326P-201ENST00000477493 296 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 RPL15P21-201ENST00000495592 567 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC018645.1-201ENST00000505003 109 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 KCTD9P2-201ENST00000512203 1013 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC108064.1-201ENST00000513791 460 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC126323.4-201ENST00000566935 234 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 RPL29P33-201ENST00000587474 316 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 PRELID3BP8-201ENST00000604148 295 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC090525.3-201ENST00000605601 189 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 SNORA74.4-201ENST00000607595 199 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 AL136295.6-201ENST00000610486 658 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 MIR3662-201ENST00000637030 95 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 HSPA8P17-201ENST00000427029 1382 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 PPBPP2-201ENST00000513150 1362 ntBASIC6.13□□□□□ -1.43
SSU72Q9NP77 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSU72Q9NP77 RNU6-1103P-201ENST00000384150 107 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL390316.1-201ENST00000406279 553 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL136133.1-201ENST00000413694 376 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL589794.1-201ENST00000424971 390 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC127526.2-201ENST00000426436 775 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 KCTD9P3-201ENST00000434597 1169 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC092106.2-201ENST00000436597 487 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 RABEPKP1-201ENST00000440529 1026 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL845321.1-201ENST00000444603 348 ntBASIC6.12□□□□□ -1.43
SSU72Q9NP77 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms