Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 CENPIP1-201ENST00000425713 902 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 RPL23AP1-201ENST00000428990 471 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 RPEP2-201ENST00000432149 701 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 MTND6P18-201ENST00000439477 513 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 TXNP2-201ENST00000443918 295 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 RPS27AP17-201ENST00000463344 455 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 OR52A4P-203ENST00000498233 1014 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC111000.3-201ENST00000508057 576 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC068790.4-201ENST00000602474 263 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AL353600.1-201ENST00000608148 251 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 MIR7641-1-201ENST00000627518 61 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AC104118.1-201ENST00000607625 1589 ntBASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCSER1Q9C0I3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RAD17P1-201ENST00000418130 2042 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 LINC01109-201ENST00000603837 3081 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 Z98755.1-201ENST00000407015 1384 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RNU1-130P-201ENST00000363930 160 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RNU1-32P-201ENST00000363937 159 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 MIR3065-201ENST00000390137 79 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RNU6-564P-201ENST00000410983 104 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC069213.2-201ENST00000420238 366 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC006065.1-201ENST00000422539 802 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RPEP3-201ENST00000425462 676 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 SKP1P3-201ENST00000429280 487 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 RN7SKP92-201ENST00000517266 244 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC009268.1-201ENST00000561352 1203 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC079587.1-201ENST00000603846 277 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 Z98200.1-201ENST00000607298 470 ntBASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.97□□□□□ -1.61
CCSER1Q9C0I3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCSER1Q9C0I3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CCSER1Q9C0I3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCSER1Q9C0I3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
CCSER1Q9C0I3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AL034374.1-201ENST00000406329 351 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 FHP1-201ENST00000442741 703 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 DHFRP3-201ENST00000455595 559 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AK3P4-201ENST00000504283 583 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC008694.2-201ENST00000517591 306 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC005034.4-201ENST00000603612 899 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AC012409.3-201ENST00000611343 981 ntBASIC4.96□□□□□ -1.62
CCSER1Q9C0I3 AL138721.1-201ENST00000616756 179 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms