Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNU6-223P-201ENST00000362830 107 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RNU4-28P-201ENST00000364739 141 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RNA5SP30-201ENST00000365552 115 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SNORA22C-201ENST00000384614 134 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 MT-RNR1-201ENST00000389680 954 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RPL6P29-201ENST00000414863 865 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 DSTNP5-201ENST00000427921 523 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC092013.1-201ENST00000438795 332 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL831737.1-201ENST00000441288 271 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 MTND1P27-201ENST00000451117 902 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC108751.3-201ENST00000461814 1020 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC091868.1-201ENST00000508746 304 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SNORA31.3-201ENST00000516029 96 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RNU6-189P-201ENST00000516120 101 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC027104.1-201ENST00000563702 681 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AP005136.1-201ENST00000579765 429 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC021171.1-201ENST00000603137 706 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RPAP2P1-201ENST00000603626 1168 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC093799.2-201ENST00000610062 578 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC084824.5-201ENST00000612009 413 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC026368.1-201ENST00000614934 690 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL445567.2-201ENST00000618935 498 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 TRIM60P19-201ENST00000452879 1462 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 MXRA5Y-201ENST00000420610 8000 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RPS3AP38-201ENST00000435889 763 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 VN1R34P-201ENST00000447387 883 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 CT45A11P-201ENST00000448043 1134 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RPL32P33-201ENST00000487023 394 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 HMGB1P41-201ENST00000520234 440 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC087477.6-201ENST00000559595 843 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC145350.1-201ENST00000567426 208 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 RN7SL690P-201ENST00000582087 240 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC027229.1-201ENST00000583887 253 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC087575.1-201ENST00000585087 229 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL357094.1-201ENST00000603845 844 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AL445435.1-201ENST00000604232 665 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC239868.4-201ENST00000608318 671 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC019131.2-201ENST00000609071 870 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 AC138915.4-201ENST00000565549 4147 ntBASIC1.77□□□□□ -2.13
HMCN1Q96RW7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HMCN1Q96RW7 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 HFE-207ENST00000357618 5286 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 SET-203ENST00000372688 801 ntTSL 2 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.76□□□□□ -2.13
HMCN1Q96RW7 AC126120.1-201ENST00000431082 470 ntBASIC1.76□□□□□ -2.13
HMCN1Q96RW7 HSPE1P25-201ENST00000455484 251 ntBASIC1.76□□□□□ -2.13
HMCN1Q96RW7 RN7SL447P-201ENST00000494711 245 ntBASIC1.76□□□□□ -2.13
HMCN1Q96RW7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms