Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SNORA70H-201ENST00000383910 135 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 SNORA70J-201ENST00000384182 135 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 Y_RNA.450-201ENST00000384198 113 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 RPL35AP31-201ENST00000418340 337 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 MTCYBP24-201ENST00000420387 1106 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 RPS27AP14-201ENST00000422868 454 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC007742.1-201ENST00000425789 329 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 USP12PX-201ENST00000432383 1057 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 PNKDP1-201ENST00000435914 430 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ELOCP26-201ENST00000436067 329 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC092427.1-201ENST00000439177 601 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 PSPHP1-201ENST00000450062 261 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC098847.1-201ENST00000473094 348 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 RN7SKP35-201ENST00000517210 151 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC090578.1-201ENST00000604955 591 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC008555.7-201ENST00000605008 583 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 TUG1_1.1-201ENST00000610654 145 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC131902.3-201ENST00000611767 581 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 MIR7973-1-201ENST00000614683 76 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL512652.1-201ENST00000619006 500 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AL137067.2-201ENST00000621202 131 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC124864.2-201ENST00000624736 186 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 AP000550.3-201ENST00000637734 379 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 PROS2P-201ENST00000474651 1951 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD1Q96NR3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC022325.1-201ENST00000502748 2199 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 KYNUP3-201ENST00000574386 1341 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AOX3P-204ENST00000491025 2107 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC093225.1-201ENST00000506867 1408 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 DNM1P47-203ENST00000571780 12667 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 COX6B1P3-201ENST00000312310 260 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RNA5SP375-201ENST00000362975 119 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RNU6-1122P-201ENST00000384449 107 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC025750.1-201ENST00000399891 379 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 FGF7P8-201ENST00000402994 292 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SNORA11.5-201ENST00000408163 128 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 MTATP6P27-201ENST00000416987 621 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL121878.1-201ENST00000418638 859 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RPS17P17-201ENST00000419392 409 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 MTND4LP10-201ENST00000435146 291 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC023141.3-201ENST00000436698 278 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL353662.1-201ENST00000439099 327 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC097463.1-201ENST00000447288 481 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 RPS27AP3-201ENST00000453803 454 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SEPT7P3-201ENST00000455017 621 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC099521.1-201ENST00000482557 334 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC091544.1-201ENST00000484702 348 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 TOMM20P1-201ENST00000534518 427 ntBASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTCHD1Q96NR3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms