Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 MIR7975-201ENST00000619350 68 ntBASIC6.89□□□□□ -1.31
TOPBP1Q92547 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
TOPBP1Q92547 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TOPBP1Q92547 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TOPBP1Q92547 RNA5SP72-201ENST00000364442 117 ntBASIC6.88□□□□□ -1.31
TOPBP1Q92547 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TOPBP1Q92547 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 UBE2CP3-201ENST00000502715 450 ntBASIC6.88□□□□□ -1.31
TOPBP1Q92547 NDUFA5P2-201ENST00000519723 344 ntBASIC6.88□□□□□ -1.31
TOPBP1Q92547 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 AC008966.2-201ENST00000606157 453 ntBASIC6.88□□□□□ -1.31
TOPBP1Q92547 AC005972.3-201ENST00000606304 481 ntBASIC6.88□□□□□ -1.31
TOPBP1Q92547 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TOPBP1Q92547 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.88□□□□□ -1.31
TOPBP1Q92547 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TOPBP1Q92547 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
TOPBP1Q92547 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 CASC19-204ENST00000641001 2055 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 SNORA60-201ENST00000362396 134 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 RNU1-44P-201ENST00000384453 163 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 HSFY1P1-201ENST00000423928 1178 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 RPL7P4-203ENST00000430239 730 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 AC115115.1-201ENST00000449927 248 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 MIR5195-201ENST00000583555 115 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 AC015726.1-201ENST00000602353 681 ntBASIC6.87□□□□□ -1.31
TOPBP1Q92547 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.87□□□□□ -1.31
TOPBP1Q92547 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TOPBP1Q92547 CCAT2-201ENST00000630920 1752 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 U1.1-201ENST00000384101 164 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 GMPSP1-201ENST00000514075 579 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 MIR4660-201ENST00000583549 74 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 MIR3922-201ENST00000585192 84 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 U3.45-201ENST00000607547 219 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC234782.5-201ENST00000617723 324 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 MAPK10-286ENST00000641208 8747 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC023632.6-201ENST00000624338 2177 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 SNORA5.1-201ENST00000384275 131 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC018635.1-201ENST00000468292 1030 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 AL358832.1-201ENST00000497800 389 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 RNA5SP230-201ENST00000517039 122 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 MIR3651-201ENST00000630427 90 ntBASIC6.86□□□□□ -1.31
TOPBP1Q92547 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.86□□□□□ -1.31
TOPBP1Q92547 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TOPBP1Q92547 MIR634-201ENST00000385208 97 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 AL078604.1-201ENST00000404609 466 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 TRIM60P17-201ENST00000415181 719 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TOPBP1Q92547 AC092691.2-201ENST00000461787 803 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 RPL23AP37-201ENST00000479658 549 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 WBP1LP4-201ENST00000505043 344 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 AC106782.4-201ENST00000568264 210 ntBASIC6.85□□□□□ -1.31
TOPBP1Q92547 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
TOPBP1Q92547 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms