Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 HMGN1P20-201ENST00000411849 300 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL161449.1-201ENST00000414531 1199 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL353743.4-201ENST00000422653 1547 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 CDC27P2-201ENST00000425026 1922 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC092651.1-201ENST00000426110 312 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 VTI1BP4-201ENST00000427516 527 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 RPL7P29-201ENST00000437151 728 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 TCEA1P3-201ENST00000443005 880 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 RPL36AP33-201ENST00000450395 310 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC072039.1-201ENST00000477611 581 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 ACTG1P13-201ENST00000486987 1043 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 RN7SL57P-201ENST00000493687 290 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC008549.1-201ENST00000512900 643 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 IGJP1-201ENST00000522682 475 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 TRIM77BP-201ENST00000524985 1119 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC087883.1-201ENST00000551882 391 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC006272.2-201ENST00000594725 163 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AP002884.5-201ENST00000595053 1132 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AC004948.1-201ENST00000609858 672 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 AL034546.1-201ENST00000623740 3693 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CPEB3Q8NE35 MFSD8-219ENST00000641228 2559 ntBASIC5.1□□□□□ -1.59
CPEB3Q8NE35 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AL359955.1-201ENST00000455242 3275 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 Y_RNA.311-201ENST00000365068 96 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 RNU6-98P-201ENST00000384173 107 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 RNU6-532P-201ENST00000384318 107 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 MTND1P21-201ENST00000412991 285 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 RPS15AP38-201ENST00000413110 372 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 EIF1P1-201ENST00000421436 341 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC004448.2-201ENST00000422360 586 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 BX323845.3-201ENST00000428215 527 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC073410.1-201ENST00000435125 589 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 RPL12P11-201ENST00000439970 501 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 HMGN1P2-201ENST00000445197 310 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 MTND1P16-201ENST00000465177 898 ntBASIC5.09□□□□□ -1.59
CPEB3Q8NE35 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.09□□□□□ -1.59
CPEB3Q8NE35 RPS7P6-201ENST00000485777 579 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms