Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 ENSAP1-201ENST00000392855 326 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 HSPD1P21-201ENST00000436541 245 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 RN7SKP141-201ENST00000516167 338 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AC005618.4-201ENST00000625053 554 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AL603750.1-201ENST00000624216 1717 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.13□□□□□ -1.75
RIF1Q5UIP0 PRO1804-201ENST00000623780 2050 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 MAPK10-320ENST00000641462 6696 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AL672167.1-205ENST00000641112 3080 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC093719.1-202ENST00000392735 373 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 FCF1P5-201ENST00000406490 482 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 SNORA57.3-201ENST00000411095 141 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC011816.2-201ENST00000607089 556 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 RNU11-4P-201ENST00000391149 133 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 PCNPP4-201ENST00000414817 517 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 RPS3AP14-201ENST00000483907 780 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 UBE2CP3-201ENST00000502715 450 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC008013.2-202ENST00000637965 364 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 MAPK10-304ENST00000641341 3984 ntBASIC4.12□□□□□ -1.75
RIF1Q5UIP0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RIF1Q5UIP0 AC093671.1-201ENST00000624981 2929 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 RPL21P67-201ENST00000402896 478 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC017015.1-201ENST00000477387 286 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 CYCSP30-201ENST00000546447 172 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC010653.1-201ENST00000571108 881 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 U3.45-201ENST00000607547 219 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC243654.2-201ENST00000612843 443 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 AC009120.7-201ENST00000623452 780 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 TET1P1-201ENST00000426627 2301 ntBASIC4.11□□□□□ -1.75
RIF1Q5UIP0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RIF1Q5UIP0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms