Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AF228730.2-201ENST00000438784 848 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 ABCF2P2-201ENST00000450549 296 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 HAUS8P1-201ENST00000549005 542 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 MIR3691-201ENST00000578066 90 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 MIR3176-201ENST00000582210 90 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AC011445.2-201ENST00000599274 173 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 MIR432-201ENST00000606207 94 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 Z98200.1-201ENST00000607298 470 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AL590763.1-201ENST00000398297 1545 ntBASIC3.93□□□□□ -1.78
CCDC58Q4VC31 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC58Q4VC31 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC025031.4-201ENST00000621248 3271 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 INTS6P1-201ENST00000504674 2530 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 RN7SKP56-201ENST00000410513 331 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC115285.1-201ENST00000424879 736 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 BTF3P13-201ENST00000513224 490 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AP001880.2-201ENST00000538233 448 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 EDDM3DP-201ENST00000554692 434 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 SUMO2P15-201ENST00000604285 278 ntBASIC3.92□□□□□ -1.78
CCDC58Q4VC31 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC58Q4VC31 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 MFSD8-242ENST00000641690 4199 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 OR1F12-201ENST00000402365 945 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 RNA5SP113-201ENST00000410486 84 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 RPL12P34-201ENST00000424532 479 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AL049745.1-201ENST00000433953 286 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 MTND4LP2-201ENST00000502312 285 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AC017037.1-201ENST00000508460 471 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 RPL7L1P4-201ENST00000513004 707 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 SOX5P1-201ENST00000524155 1127 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 SNORD39.2-201ENST00000579995 76 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 MIR1269B-201ENST00000580405 75 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AL512782.1-201ENST00000603093 364 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AL160290.3-201ENST00000604869 165 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 AL034351.1-201ENST00000605288 668 ntBASIC3.91□□□□□ -1.78
CCDC58Q4VC31 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
CCDC58Q4VC31 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CCDC58Q4VC31 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC58Q4VC31 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC58Q4VC31 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC58Q4VC31 MIR1911-201ENST00000410783 80 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 RN7SKP100-201ENST00000411258 284 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
CCDC58Q4VC31 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms