Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 AP001284.1-201ENST00000528393 2118 ntBASIC2.53□□□□□ -2
HSPG2P98160 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HSPG2P98160 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
HSPG2P98160 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.53□□□□□ -2
HSPG2P98160 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.53□□□□□ -2
HSPG2P98160 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
HSPG2P98160 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.53□□□□□ -2.01
HSPG2P98160 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HSPG2P98160 NAP1L4P1-201ENST00000319092 1157 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.52□□□□□ -2.01
HSPG2P98160 RPL35AP21-201ENST00000437667 333 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HSPG2P98160 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 ANKRD36P1-201ENST00000344424 659 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 IL6STP1-201ENST00000346911 1020 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AC093166.2-201ENST00000455969 1017 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AL160290.3-201ENST00000604869 165 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC010329.1-201ENST00000593903 8328 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 LRRC37A9P-201ENST00000603850 5376 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 CASC19-206ENST00000641028 1430 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AL590609.2-201ENST00000421430 368 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 CEACAMP1-201ENST00000434624 1035 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AC005726.1-201ENST00000494679 427 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 MYL12BP2-201ENST00000503948 512 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AC104619.4-201ENST00000510773 249 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
HSPG2P98160 AL033523.1-201ENST00000605153 153 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AL359757.2-201ENST00000624309 274 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 AC011755.1-201ENST00000623763 2049 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 AC079809.1-201ENST00000415468 276 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AL358472.1-201ENST00000431295 329 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AGGF1P3-201ENST00000493675 1213 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HSPG2P98160 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.52□□□□□ -2.01
HSPG2P98160 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 RN7SKP141-201ENST00000516167 338 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 RNU4ATAC18P-201ENST00000516179 126 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.52□□□□□ -2.01
HSPG2P98160 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.52□□□□□ -2.01
HSPG2P98160 AF001550.2-201ENST00000636643 217 ntBASIC2.52□□□□□ -2.01
HSPG2P98160 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC2.51□□□□□ -2.01
HSPG2P98160 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HSPG2P98160 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HSPG2P98160 SNORA70.6-201ENST00000383934 134 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AJ239321.1-201ENST00000424255 564 ntBASIC2.51□□□□□ -2.01
HSPG2P98160 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.51□□□□□ -2.01
HSPG2P98160 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms