Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLCN2P51788 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCN2P51788 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN2P51788 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.29□□□□□ -1.56
CLCN2P51788 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN2P51788 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN2P51788 AL445437.1-201ENST00000623157 3087 ntBASIC5.29□□□□□ -1.56
CLCN2P51788 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLCN2P51788 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.29□□□□□ -1.56
CLCN2P51788 MRE11P1-201ENST00000464884 2127 ntBASIC5.29□□□□□ -1.56
CLCN2P51788 SRRM1P3-201ENST00000426911 2678 ntBASIC5.29□□□□□ -1.56
CLCN2P51788 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCN2P51788 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 AL022322.2-201ENST00000624072 20397 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 PHKBP1-201ENST00000450951 1951 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCN2P51788 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCN2P51788 RNA5SP30-201ENST00000365552 115 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 RNU6-532P-201ENST00000384318 107 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AP000357.1-201ENST00000409926 1165 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.28□□□□□ -1.56
CLCN2P51788 RNU4-72P-201ENST00000410754 173 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 RNA5SP498-201ENST00000411342 120 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 VTA1P1-201ENST00000414044 866 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 TAF13P2-201ENST00000416876 286 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC099336.2-201ENST00000422457 254 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 GSTA7P-201ENST00000438425 448 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AL450263.2-201ENST00000439400 589 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AP000281.1-201ENST00000444036 316 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC099560.2-201ENST00000457554 255 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 RNU7-140P-201ENST00000459546 60 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN2P51788 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN2P51788 HIGD1AP18-201ENST00000520730 278 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC100784.1-201ENST00000522790 310 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN2P51788 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.28□□□□□ -1.56
CLCN2P51788 ATP5F1P7-201ENST00000567330 760 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC123786.2-201ENST00000603459 275 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 VIS1.1-201ENST00000610517 203 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 MIR6862-1-201ENST00000613016 70 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 MIR6862-2-201ENST00000614755 70 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC015908.5-201ENST00000623289 343 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AP000676.3-201ENST00000623299 569 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 CU639417.4-201ENST00000623928 207 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 OR8B1P-202ENST00000641132 1178 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AC100778.3-201ENST00000580060 1750 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLCN2P51788 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.28□□□□□ -1.56
CLCN2P51788 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 AC114786.1-201ENST00000512892 1415 ntBASIC5.28□□□□□ -1.56
CLCN2P51788 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.28□□□□□ -1.56
CLCN2P51788 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLCN2P51788 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.28□□□□□ -1.56
CLCN2P51788 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLCN2P51788 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCN2P51788 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN2P51788 SMG1P4-204ENST00000523028 4131 ntBASIC5.27□□□□□ -1.57
CLCN2P51788 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CLCN2P51788 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.27□□□□□ -1.57
CLCN2P51788 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN2P51788 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLCN2P51788 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.27□□□□□ -1.57
CLCN2P51788 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLCN2P51788 RNU6-304P-201ENST00000364855 107 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms