Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC107016.1-201ENST00000550463 337 ntBASIC7.34□□□□□ -1.24
SMARCA4P51532 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.34□□□□□ -1.24
SMARCA4P51532 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SMARCA4P51532 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.34□□□□□ -1.24
SMARCA4P51532 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
SMARCA4P51532 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.34□□□□□ -1.24
SMARCA4P51532 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SMARCA4P51532 AL022393.1-201ENST00000625142 1677 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
SMARCA4P51532 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 AC058791.1-201ENST00000608412 3198 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 MIR133A2-201ENST00000347538 102 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SMARCA4P51532 MIR30B-201ENST00000384850 88 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.33□□□□□ -1.24
SMARCA4P51532 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.33□□□□□ -1.24
SMARCA4P51532 AL451050.1-201ENST00000450126 415 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 NDUFA5P2-201ENST00000519723 344 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 AC087369.1-201ENST00000520775 996 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.33□□□□□ -1.24
SMARCA4P51532 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMARCA4P51532 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SMARCA4P51532 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
SMARCA4P51532 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC7.32□□□□□ -1.24
SMARCA4P51532 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.32□□□□□ -1.24
SMARCA4P51532 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SMARCA4P51532 AC006971.1-201ENST00000407916 4486 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
SMARCA4P51532 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
SMARCA4P51532 AC007068.1-201ENST00000396690 844 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.32□□□□□ -1.24
SMARCA4P51532 RPL23AP25-201ENST00000430973 463 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 PLGLA-201ENST00000465668 449 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 AC018635.1-201ENST00000468292 1030 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 TRAPPC2P2-201ENST00000517589 409 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.32□□□□□ -1.24
SMARCA4P51532 AC090151.1-201ENST00000520784 730 ntBASIC7.32□□□□□ -1.24
SMARCA4P51532 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.32□□□□□ -1.24
SMARCA4P51532 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.32□□□□□ -1.24
SMARCA4P51532 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMARCA4P51532 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SMARCA4P51532 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 TRIM60P17-201ENST00000415181 719 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 OR2AH1P-201ENST00000425717 928 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 AC092691.2-201ENST00000461787 803 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 RPS3AP6-201ENST00000484430 795 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 AC005858.4-201ENST00000623191 700 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 AF001550.2-201ENST00000636643 217 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 AC097461.1-201ENST00000568928 2821 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.31□□□□□ -1.24
SMARCA4P51532 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 AC005005.4-201ENST00000623789 16698 ntBASIC7.31□□□□□ -1.24
SMARCA4P51532 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SMARCA4P51532 AL159987.2-201ENST00000432754 307 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 RPL29P14-201ENST00000495837 428 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 AC093853.1-201ENST00000515689 483 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.3□□□□□ -1.24
SMARCA4P51532 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.3□□□□□ -1.24
SMARCA4P51532 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.3□□□□□ -1.24
SMARCA4P51532 AC015726.1-201ENST00000602353 681 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 MIR8069-1-201ENST00000616627 86 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 MIR8069-2-201ENST00000621412 86 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SMARCA4P51532 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SMARCA4P51532 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SMARCA4P51532 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC7.3□□□□□ -1.24
SMARCA4P51532 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SMARCA4P51532 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SMARCA4P51532 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SMARCA4P51532 HMGB3P19-201ENST00000403971 560 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 AC245052.5-201ENST00000416320 649 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.3□□□□□ -1.24
SMARCA4P51532 UBE2CP3-201ENST00000502715 450 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 HMGN1P15-201ENST00000513870 295 ntBASIC7.3□□□□□ -1.24
SMARCA4P51532 AL442067.2-201ENST00000614033 363 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms