Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RORAP35398 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.4□□□□□ -1.71
RORAP35398 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RORAP35398 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RORAP35398 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RORAP35398 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RORAP35398 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.4□□□□□ -1.71
RORAP35398 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.39□□□□□ -1.71
RORAP35398 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RORAP35398 RNU6-984P-201ENST00000363236 109 ntBASIC4.39□□□□□ -1.71
RORAP35398 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC068538.1-201ENST00000376856 336 ntBASIC4.39□□□□□ -1.71
RORAP35398 RNU6-225P-201ENST00000384613 103 ntBASIC4.39□□□□□ -1.71
RORAP35398 SDHCP2-201ENST00000398565 501 ntBASIC4.39□□□□□ -1.71
RORAP35398 Z98745.1-201ENST00000402553 494 ntBASIC4.39□□□□□ -1.71
RORAP35398 CASKP1-201ENST00000412870 582 ntBASIC4.39□□□□□ -1.71
RORAP35398 RPL12P34-201ENST00000424532 479 ntBASIC4.39□□□□□ -1.71
RORAP35398 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.39□□□□□ -1.71
RORAP35398 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.39□□□□□ -1.71
RORAP35398 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.39□□□□□ -1.71
RORAP35398 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 AC104651.2-201ENST00000447549 528 ntBASIC4.39□□□□□ -1.71
RORAP35398 RAB28P3-201ENST00000448325 597 ntBASIC4.39□□□□□ -1.71
RORAP35398 MTND2P28-201ENST00000457540 1044 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC022336.1-201ENST00000475510 337 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC013356.1-201ENST00000489027 564 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC026979.1-201ENST00000492525 396 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC025674.1-201ENST00000507074 324 ntBASIC4.39□□□□□ -1.71
RORAP35398 NDUFB4P12-201ENST00000513465 390 ntBASIC4.39□□□□□ -1.71
RORAP35398 MYL12AP1-201ENST00000518490 515 ntBASIC4.39□□□□□ -1.71
RORAP35398 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.39□□□□□ -1.71
RORAP35398 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.39□□□□□ -1.71
RORAP35398 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.39□□□□□ -1.71
RORAP35398 TRAV11-201ENST00000539512 339 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC068831.4-201ENST00000556118 109 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC068714.1-201ENST00000559623 800 ntBASIC4.39□□□□□ -1.71
RORAP35398 HNRNPCP4-201ENST00000571636 900 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.39□□□□□ -1.71
RORAP35398 AC115286.1-201ENST00000604298 434 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC117490.2-201ENST00000610042 594 ntBASIC4.39□□□□□ -1.71
RORAP35398 AC015804.1-201ENST00000622935 435 ntBASIC4.39□□□□□ -1.71
RORAP35398 AL359757.1-201ENST00000623176 255 ntBASIC4.39□□□□□ -1.71
RORAP35398 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.39□□□□□ -1.71
RORAP35398 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.39□□□□□ -1.71
RORAP35398 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RORAP35398 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RORAP35398 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.39□□□□□ -1.71
RORAP35398 AL049555.1-201ENST00000562834 1933 ntBASIC4.38□□□□□ -1.71
RORAP35398 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 AC026951.1-201ENST00000559530 2459 ntBASIC4.38□□□□□ -1.71
RORAP35398 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.38□□□□□ -1.71
RORAP35398 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 RAD17P1-201ENST00000418130 2042 ntBASIC4.38□□□□□ -1.71
RORAP35398 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.38□□□□□ -1.71
RORAP35398 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RORAP35398 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
RORAP35398 RPL32P3-201ENST00000359025 275 ntBASIC4.38□□□□□ -1.71
RORAP35398 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RORAP35398 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.38□□□□□ -1.71
RORAP35398 RPL21P108-201ENST00000413857 481 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 AL592293.2-201ENST00000422292 996 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.38□□□□□ -1.71
RORAP35398 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC021205.1-201ENST00000468797 348 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC104763.1-201ENST00000475274 360 ntBASIC4.38□□□□□ -1.71
RORAP35398 MTND6P6-201ENST00000478031 263 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC091917.2-201ENST00000505002 744 ntBASIC4.38□□□□□ -1.71
RORAP35398 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
RORAP35398 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RORAP35398 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.38□□□□□ -1.71
RORAP35398 AP001542.1-201ENST00000591314 200 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.38□□□□□ -1.71
RORAP35398 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 AL133243.1-201ENST00000614487 366 ntBASIC4.38□□□□□ -1.71
RORAP35398 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.38□□□□□ -1.71
RORAP35398 AL121873.1-201ENST00000616013 524 ntBASIC4.38□□□□□ -1.71
RORAP35398 AL731566.2-201ENST00000618971 317 ntBASIC4.38□□□□□ -1.71
RORAP35398 AC002044.3-201ENST00000623314 541 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms