Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
HOXC12P31275 OR2M1P-201ENST00000318104 951 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 AL451142.1-201ENST00000375867 775 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC12P31275 RNU6-657P-201ENST00000383904 107 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 MIR188-201ENST00000385034 86 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 RPL17P50-201ENST00000396131 546 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 VN1R8P-201ENST00000407739 893 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 Y_RNA.598-201ENST00000410480 95 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 USP9YP18-201ENST00000425912 695 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 MTND3P21-201ENST00000433774 331 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC122718.1-201ENST00000439448 744 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 VN1R38P-201ENST00000450265 887 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC003071.1-201ENST00000451219 789 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 TRGVB-201ENST00000453257 471 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 FAM133DP-201ENST00000464802 691 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC108941.1-201ENST00000502853 530 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC105252.1-201ENST00000503089 286 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 MYL12BP2-201ENST00000503948 512 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC021678.1-201ENST00000505195 936 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 SNORA58-201ENST00000505219 137 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 NDUFB4P2-201ENST00000509515 391 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 RNU6-488P-201ENST00000515918 99 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC006960.3-201ENST00000561845 705 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 AC137800.2-201ENST00000574375 120 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC020765.1-201ENST00000604296 328 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AL159169.3-201ENST00000608871 561 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 AC116563.2-201ENST00000624751 535 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HOXC12P31275 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 AC104966.1-201ENST00000467010 1464 ntBASIC5.7□□□□□ -1.5
HOXC12P31275 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC12P31275 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC12P31275 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC12P31275 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 Y_RNA.97-201ENST00000363094 102 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 U8.14-201ENST00000390843 143 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 RNU6-248P-201ENST00000410720 107 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.69□□□□□ -1.5
HOXC12P31275 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AL158073.1-201ENST00000426848 1104 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXC12P31275 AMYP1-201ENST00000440059 1023 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC12P31275 RPL5P7-201ENST00000444235 813 ntBASIC5.69□□□□□ -1.5
HOXC12P31275 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC12P31275 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXC12P31275 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms