Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.14□□□□□ -1.27
RFX1P22670 AL390334.1-201ENST00000556395 450 ntBASIC7.14□□□□□ -1.27
RFX1P22670 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.14□□□□□ -1.27
RFX1P22670 AC026826.3-201ENST00000561747 158 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.14□□□□□ -1.27
RFX1P22670 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC7.14□□□□□ -1.27
RFX1P22670 AC063977.5-201ENST00000601044 974 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC091133.5-201ENST00000603088 301 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC091193.1-201ENST00000604640 448 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AL136097.3-201ENST00000611097 505 ntBASIC7.14□□□□□ -1.27
RFX1P22670 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 RN7SL261P-201ENST00000613441 282 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC104260.1-201ENST00000616660 539 ntBASIC7.14□□□□□ -1.27
RFX1P22670 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RFX1P22670 MIR7854-201ENST00000620068 65 ntBASIC7.14□□□□□ -1.27
RFX1P22670 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.14□□□□□ -1.27
RFX1P22670 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.14□□□□□ -1.27
RFX1P22670 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RFX1P22670 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX1P22670 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 AC112243.1-201ENST00000623949 3851 ntBASIC7.13□□□□□ -1.27
RFX1P22670 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX1P22670 TNPO1P2-201ENST00000426249 2665 ntBASIC7.13□□□□□ -1.27
RFX1P22670 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX1P22670 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 AC008033.1-201ENST00000216407 1162 ntBASIC7.13□□□□□ -1.27
RFX1P22670 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 RNU6-984P-201ENST00000363236 109 ntBASIC7.13□□□□□ -1.27
RFX1P22670 RNA5SP485-201ENST00000365053 119 ntBASIC7.13□□□□□ -1.27
RFX1P22670 RNA5SP85-201ENST00000365378 119 ntBASIC7.13□□□□□ -1.27
RFX1P22670 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 AL359694.1-201ENST00000403247 604 ntBASIC7.13□□□□□ -1.27
RFX1P22670 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.13□□□□□ -1.27
RFX1P22670 AL929472.1-201ENST00000417484 429 ntBASIC7.13□□□□□ -1.27
RFX1P22670 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 MTND5P14-201ENST00000441481 1267 ntBASIC7.13□□□□□ -1.27
RFX1P22670 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 DPPA3P1-201ENST00000448050 469 ntBASIC7.13□□□□□ -1.27
RFX1P22670 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 HMGB1P7-201ENST00000450921 612 ntBASIC7.13□□□□□ -1.27
RFX1P22670 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RFX1P22670 RN7SL413P-201ENST00000482700 297 ntBASIC7.13□□□□□ -1.27
RFX1P22670 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX1P22670 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.13□□□□□ -1.27
RFX1P22670 OR8Q1P-201ENST00000526467 655 ntBASIC7.13□□□□□ -1.27
RFX1P22670 OR5M2P-201ENST00000529003 936 ntBASIC7.13□□□□□ -1.27
RFX1P22670 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 AC007068.2-201ENST00000543168 395 ntBASIC7.13□□□□□ -1.27
RFX1P22670 AL358913.1-201ENST00000554342 121 ntBASIC7.13□□□□□ -1.27
RFX1P22670 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.13□□□□□ -1.27
RFX1P22670 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.13□□□□□ -1.27
RFX1P22670 AC008536.2-201ENST00000607284 349 ntBASIC7.13□□□□□ -1.27
RFX1P22670 MLECP1-201ENST00000615893 709 ntBASIC7.13□□□□□ -1.27
RFX1P22670 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
RFX1P22670 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RFX1P22670 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.12□□□□□ -1.27
RFX1P22670 AL354685.2-201ENST00000448218 1447 ntBASIC7.12□□□□□ -1.27
RFX1P22670 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RFX1P22670 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.12□□□□□ -1.27
RFX1P22670 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms