Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 MIR122-201ENST00000385044 85 ntBASIC4.72□□□□□ -1.65
MSH3P20585 RNU1-82P-201ENST00000390851 165 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AL592291.1-201ENST00000403830 352 ntBASIC4.72□□□□□ -1.65
MSH3P20585 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 AC004938.1-201ENST00000438468 308 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AL353898.1-201ENST00000444055 238 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AL096829.2-201ENST00000446582 742 ntBASIC4.72□□□□□ -1.65
MSH3P20585 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.72□□□□□ -1.65
MSH3P20585 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AC110760.3-202ENST00000515177 371 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 AC109635.6-201ENST00000525487 1113 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MSH3P20585 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AC125612.1-201ENST00000547580 377 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 UBE2FP2-201ENST00000566646 462 ntBASIC4.72□□□□□ -1.65
MSH3P20585 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 AC091042.1-201ENST00000579213 173 ntBASIC4.72□□□□□ -1.65
MSH3P20585 MIR4480-201ENST00000582492 71 ntBASIC4.72□□□□□ -1.65
MSH3P20585 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.72□□□□□ -1.65
MSH3P20585 SNX6P1-201ENST00000601728 1224 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC096947.1-201ENST00000603233 470 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AL137072.1-201ENST00000603444 466 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AL391358.1-201ENST00000605342 190 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC090912.3-201ENST00000609775 533 ntBASIC4.72□□□□□ -1.65
MSH3P20585 Mico1.1-201ENST00000611698 204 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC091046.2-201ENST00000620775 665 ntBASIC4.72□□□□□ -1.65
MSH3P20585 AC091953.3-201ENST00000623220 236 ntBASIC4.72□□□□□ -1.65
MSH3P20585 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 AC092159.4-201ENST00000624944 550 ntBASIC4.72□□□□□ -1.65
MSH3P20585 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 AC004808.1-201ENST00000627671 721 ntBASIC4.72□□□□□ -1.65
MSH3P20585 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
MSH3P20585 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 AL442639.1-201ENST00000625030 1899 ntBASIC4.72□□□□□ -1.65
MSH3P20585 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
MSH3P20585 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.72□□□□□ -1.65
MSH3P20585 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MSH3P20585 AL133268.1-201ENST00000405676 1401 ntBASIC4.72□□□□□ -1.65
MSH3P20585 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
MSH3P20585 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
MSH3P20585 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
MSH3P20585 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.71□□□□□ -1.65
MSH3P20585 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
MSH3P20585 SALL4P2-201ENST00000423288 2910 ntBASIC4.71□□□□□ -1.66
MSH3P20585 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
MSH3P20585 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
MSH3P20585 RNU6-31P-201ENST00000384388 108 ntBASIC4.71□□□□□ -1.66
MSH3P20585 RN7SKP100-201ENST00000411258 284 ntBASIC4.71□□□□□ -1.66
MSH3P20585 RPL26P37-201ENST00000411983 438 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AL024507.1-201ENST00000412741 274 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AC004074.1-201ENST00000421810 1063 ntBASIC4.71□□□□□ -1.66
MSH3P20585 MTCYBP32-201ENST00000427945 1084 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AL360081.1-201ENST00000428299 555 ntBASIC4.71□□□□□ -1.66
MSH3P20585 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.71□□□□□ -1.66
MSH3P20585 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.71□□□□□ -1.66
MSH3P20585 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.71□□□□□ -1.66
MSH3P20585 MTCYBP21-201ENST00000443300 1113 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.71□□□□□ -1.66
MSH3P20585 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.71□□□□□ -1.66
MSH3P20585 AC069277.2-201ENST00000454211 432 ntBASIC4.71□□□□□ -1.66
MSH3P20585 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MSH3P20585 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.71□□□□□ -1.66
MSH3P20585 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.71□□□□□ -1.66
MSH3P20585 RNU5A-7P-201ENST00000515979 116 ntBASIC4.71□□□□□ -1.66
MSH3P20585 HMGB1P19-201ENST00000517578 577 ntBASIC4.71□□□□□ -1.66
MSH3P20585 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.71□□□□□ -1.66
MSH3P20585 AC104115.2-201ENST00000523026 687 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.71□□□□□ -1.66
MSH3P20585 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MSH3P20585 AC021483.2-201ENST00000567415 758 ntBASIC4.71□□□□□ -1.66
MSH3P20585 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MSH3P20585 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.71□□□□□ -1.66
MSH3P20585 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.71□□□□□ -1.66
MSH3P20585 AC073137.1-201ENST00000605636 634 ntBASIC4.71□□□□□ -1.66
MSH3P20585 OR7A19P-201ENST00000608051 733 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AC008759.3-201ENST00000613300 508 ntBASIC4.71□□□□□ -1.66
MSH3P20585 AC010608.3-201ENST00000625048 527 ntBASIC4.71□□□□□ -1.66
MSH3P20585 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.71□□□□□ -1.66
MSH3P20585 OR4G3P-201ENST00000633500 913 ntBASIC4.71□□□□□ -1.66
MSH3P20585 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.71□□□□□ -1.66
MSH3P20585 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.71□□□□□ -1.66
MSH3P20585 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MSH3P20585 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms