Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN1P18031 AP000873.5-201ENST00000533906 236 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN1P18031 MIR548Y-201ENST00000582739 110 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PTPN1P18031 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC025857.2-201ENST00000602711 238 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 AC011453.2-201ENST00000603737 729 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 AC116165.2-201ENST00000616705 206 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 MIR8080-201ENST00000622224 89 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN1P18031 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN1P18031 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN1P18031 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN1P18031 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PTPN1P18031 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.89□□□□□ -1.47
PTPN1P18031 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN1P18031 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
PTPN1P18031 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN1P18031 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.89□□□□□ -1.47
PTPN1P18031 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 AC012078.1-201ENST00000405035 1646 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
PTPN1P18031 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PTPN1P18031 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN1P18031 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PTPN1P18031 AL672167.1-206ENST00000356293 943 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 RNU6-98P-201ENST00000384173 107 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RNU6-253P-201ENST00000384730 105 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 SNORD65.1-201ENST00000390889 71 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AL391361.1-201ENST00000405580 489 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AL034374.1-201ENST00000406329 351 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RN7SKP17-201ENST00000411242 351 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AL133325.1-201ENST00000421090 382 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 MTCYBP5-201ENST00000423752 1135 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN1P18031 RPL7P44-201ENST00000424827 742 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 NPM1P49-201ENST00000448027 714 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AL606490.1-201ENST00000452266 765 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RFC5P1-201ENST00000454419 874 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RNU6-956P-201ENST00000458868 103 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 SNORD125-201ENST00000459538 96 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RN7SL51P-201ENST00000468230 285 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RN7SL583P-201ENST00000475692 287 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 SIAH1P1-201ENST00000479411 923 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RPL7P16-201ENST00000479738 738 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN1P18031 HMGB3P13-201ENST00000511263 607 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN1P18031 RN7SKP99-201ENST00000517028 307 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 IGKV2-18-201ENST00000522607 343 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 AP002812.4-201ENST00000532139 286 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC122688.1-201ENST00000541494 223 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN1P18031 AC008126.1-201ENST00000549019 480 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 AC074051.3-201ENST00000570238 358 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 MIR3176-201ENST00000582210 90 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN1P18031 AC022146.1-201ENST00000595307 847 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN1P18031 U73023.1-201ENST00000603134 700 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC103881.1-201ENST00000603476 538 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AC006270.3-201ENST00000605967 1036 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN1P18031 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 AC144833.1-201ENST00000567953 4089 ntBASIC5.88□□□□□ -1.47
PTPN1P18031 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN1P18031 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN1P18031 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 514.9 ms