Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR1254-2-201ENST00000579553 63 ntBASIC5.15□□□□□ -1.59
RB1P06400 MTATP6P2-201ENST00000603319 678 ntBASIC5.15□□□□□ -1.59
RB1P06400 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 AC024023.1-201ENST00000624530 922 ntBASIC5.15□□□□□ -1.59
RB1P06400 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.15□□□□□ -1.59
RB1P06400 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 SMG1P6-201ENST00000532337 2930 ntBASIC5.15□□□□□ -1.59
RB1P06400 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.15□□□□□ -1.59
RB1P06400 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RB1P06400 AC092376.2-201ENST00000622621 4116 ntBASIC5.14□□□□□ -1.59
RB1P06400 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 AC008758.3-201ENST00000507003 1829 ntBASIC5.14□□□□□ -1.59
RB1P06400 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RB1P06400 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 AL357515.1-201ENST00000402967 542 ntBASIC5.14□□□□□ -1.59
RB1P06400 RN7SKP267-201ENST00000410381 285 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC105402.1-201ENST00000413336 545 ntBASIC5.14□□□□□ -1.59
RB1P06400 LINC01347-201ENST00000417964 355 ntBASIC5.14□□□□□ -1.59
RB1P06400 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.14□□□□□ -1.59
RB1P06400 PNRC2P1-201ENST00000423940 420 ntBASIC5.14□□□□□ -1.59
RB1P06400 RPEP3-201ENST00000425462 676 ntBASIC5.14□□□□□ -1.59
RB1P06400 AL512637.2-201ENST00000431287 1256 ntBASIC5.14□□□□□ -1.59
RB1P06400 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC025674.1-201ENST00000507074 324 ntBASIC5.14□□□□□ -1.59
RB1P06400 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.14□□□□□ -1.59
RB1P06400 RNU6-334P-201ENST00000517072 102 ntBASIC5.14□□□□□ -1.59
RB1P06400 Y_RNA.719-201ENST00000517156 106 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.14□□□□□ -1.59
RB1P06400 AC138701.1-201ENST00000524329 714 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC104229.1-201ENST00000561364 255 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC084783.1-201ENST00000565846 910 ntBASIC5.14□□□□□ -1.59
RB1P06400 MTCYBP13-201ENST00000578634 1093 ntBASIC5.14□□□□□ -1.59
RB1P06400 MIR5699-201ENST00000578903 90 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC022884.3-201ENST00000579571 248 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC010857.1-201ENST00000606398 594 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC011944.2-201ENST00000624440 683 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC106858.1-201ENST00000637497 429 ntBASIC5.14□□□□□ -1.59
RB1P06400 AC010300.1-201ENST00000600671 5134 ntBASIC5.14□□□□□ -1.59
RB1P06400 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RB1P06400 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 AC104260.2-201ENST00000623551 3497 ntBASIC5.14□□□□□ -1.59
RB1P06400 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RB1P06400 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RB1P06400 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
RB1P06400 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
RB1P06400 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RB1P06400 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.13□□□□□ -1.59
RB1P06400 SNORA73.1-201ENST00000363107 205 ntBASIC5.13□□□□□ -1.59
RB1P06400 SNORA57.1-201ENST00000391227 145 ntBASIC5.13□□□□□ -1.59
RB1P06400 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RB1P06400 HMGB1P13-201ENST00000406019 642 ntBASIC5.13□□□□□ -1.59
RB1P06400 LINC00993-201ENST00000420453 540 ntBASIC5.13□□□□□ -1.59
RB1P06400 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
RB1P06400 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.13□□□□□ -1.59
RB1P06400 YWHAZP2-201ENST00000440317 728 ntBASIC5.13□□□□□ -1.59
RB1P06400 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 RPL7P55-201ENST00000450522 746 ntBASIC5.13□□□□□ -1.59
RB1P06400 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.13□□□□□ -1.59
RB1P06400 RPS17P2-201ENST00000461663 408 ntBASIC5.13□□□□□ -1.59
RB1P06400 AC011276.1-201ENST00000469688 323 ntBASIC5.13□□□□□ -1.59
RB1P06400 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.13□□□□□ -1.59
RB1P06400 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.13□□□□□ -1.59
RB1P06400 AL049874.2-201ENST00000492636 288 ntBASIC5.13□□□□□ -1.59
RB1P06400 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.13□□□□□ -1.59
RB1P06400 AC112518.2-201ENST00000508565 425 ntBASIC5.13□□□□□ -1.59
RB1P06400 AC133963.2-201ENST00000513686 578 ntBASIC5.13□□□□□ -1.59
RB1P06400 AL109766.1-201ENST00000555080 552 ntBASIC5.13□□□□□ -1.59
RB1P06400 MIR4660-201ENST00000583549 74 ntBASIC5.13□□□□□ -1.59
RB1P06400 KPNA2P3-201ENST00000584190 848 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms