Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGN2P05204 AC104662.1-201ENST00000604448 511 ntBASIC3.84□□□□□ -1.79
HMGN2P05204 MIR3653-201ENST00000625572 110 ntBASIC3.84□□□□□ -1.79
HMGN2P05204 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGN2P05204 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.84□□□□□ -1.79
HMGN2P05204 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGN2P05204 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HMGN2P05204 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HMGN2P05204 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.84□□□□□ -1.8
HMGN2P05204 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.84□□□□□ -1.8
HMGN2P05204 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HMGN2P05204 PROS2P-201ENST00000474651 1951 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HMGN2P05204 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGN2P05204 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGN2P05204 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGN2P05204 RNU1-32P-201ENST00000363937 159 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGN2P05204 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGN2P05204 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGN2P05204 VDAC1P6-201ENST00000430062 855 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 AC069285.2-201ENST00000440210 275 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGN2P05204 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGN2P05204 UQCRHP4-201ENST00000471686 272 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 RN7SL481P-201ENST00000477764 299 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 RPL29P14-201ENST00000495837 428 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 KRT19P6-201ENST00000510983 209 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGN2P05204 RNA5SP228-201ENST00000516232 133 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGN2P05204 OR7E10P-201ENST00000526420 991 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGN2P05204 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGN2P05204 AL390334.1-201ENST00000556395 450 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 IPO5P1-202ENST00000600039 287 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 AC114878.2-201ENST00000604863 1251 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HMGN2P05204 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGN2P05204 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
HMGN2P05204 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 AC053481.2-202ENST00000582394 1500 ntBASIC3.83□□□□□ -1.8
HMGN2P05204 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
HMGN2P05204 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HMGN2P05204 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
HMGN2P05204 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HMGN2P05204 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HMGN2P05204 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGN2P05204 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 CCT8P1-201ENST00000413611 1657 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGN2P05204 LARP1BP1-201ENST00000506036 1359 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGN2P05204 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 RNA5SP306-201ENST00000411087 107 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGN2P05204 MTCO1P54-201ENST00000430139 712 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 AL358472.1-201ENST00000431295 329 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 AL353748.1-201ENST00000440753 474 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 RPL7P1-201ENST00000468161 747 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 RPL7P9-201ENST00000468715 747 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGN2P05204 AC106806.2-201ENST00000509365 500 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 OR51K1P-201ENST00000510214 950 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.82□□□□□ -1.8
HMGN2P05204 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGN2P05204 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGN2P05204 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGN2P05204 AL451044.1-201ENST00000604867 238 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 AL773545.4-201ENST00000637262 310 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 AL513478.4-201ENST00000641636 310 ntBASIC3.82□□□□□ -1.8
HMGN2P05204 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HMGN2P05204 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.82□□□□□ -1.8
HMGN2P05204 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HMGN2P05204 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGN2P05204 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGN2P05204 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HMGN2P05204 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGN2P05204 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGN2P05204 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
HMGN2P05204 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGN2P05204 AL590806.1-201ENST00000415818 853 ntBASIC3.81□□□□□ -1.8
HMGN2P05204 GAPDHP49-201ENST00000421421 961 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms