Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 CDY13P-201ENST00000445813 1015 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 MTND2P25-201ENST00000449028 610 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 CDY23P-201ENST00000451661 1014 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC110749.1-201ENST00000462007 357 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RN7SL222P-201ENST00000476452 299 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RN7SL629P-201ENST00000489622 285 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC098799.3-201ENST00000506095 438 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC016550.3-201ENST00000515706 767 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RNU6-760P-201ENST00000516078 97 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC022832.1-201ENST00000530718 645 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 HAUS8P1-201ENST00000549005 542 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC012414.2-201ENST00000559474 187 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 MIR3691-201ENST00000578066 90 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC090312.1-201ENST00000580637 348 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 OR7A19P-201ENST00000608051 733 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC078899.5-201ENST00000612475 178 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC015908.5-201ENST00000623289 343 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC145207.9-201ENST00000623802 325 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 AL590763.1-201ENST00000398297 1545 ntBASIC3.39□□□□□ -1.87
HLA-DQA1P01909 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1P01909 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 OR5T3-201ENST00000303059 1023 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNA5SP307-201ENST00000362863 116 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 SNORA27.3-201ENST00000364937 134 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU6-532P-201ENST00000384318 107 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU6-31P-201ENST00000384388 108 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU6-244P-201ENST00000391028 104 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 Z97832.1-201ENST00000402490 328 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL603766.1-201ENST00000407763 664 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RN7SKP222-201ENST00000410651 315 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL606490.7-201ENST00000433136 191 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC114878.1-201ENST00000441166 358 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC245517.2-201ENST00000442890 346 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 HMGB3P22-202ENST00000451823 572 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 DDX39BP2-208ENST00000453923 258 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL389915.2-201ENST00000454576 441 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 snoU13.20-201ENST00000459180 104 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RN7SL585P-201ENST00000470538 280 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC006499.3-201ENST00000506077 748 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 COX6B1P5-201ENST00000509843 249 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC108471.1-201ENST00000513977 287 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU1-6P-201ENST00000516290 144 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNA5SP92-201ENST00000516437 110 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 MIR2114-201ENST00000516645 80 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RN7SKP66-201ENST00000516681 231 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNA5SP34-201ENST00000516887 130 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 RNU6-889P-201ENST00000517189 103 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 ADAD1P2-201ENST00000588476 646 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC012603.1-201ENST00000606424 528 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC007546.2-201ENST00000623996 360 ntBASIC3.38□□□□□ -1.87
HLA-DQA1P01909 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1P01909 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms