Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MRPS28Q9Y2Q9 ECM1P2-201ENST00000503354 1577 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC120338.1-201ENST00000625074 1541 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC008549.2-201ENST00000333482 706 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 SNORA17.1-201ENST00000362945 126 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RNU1-43P-201ENST00000365052 165 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ANAPC10P1-201ENST00000395991 556 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL592291.1-201ENST00000403830 352 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL391361.1-201ENST00000405580 489 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RNU2-50P-201ENST00000410494 143 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL592310.1-201ENST00000414330 671 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RGS17P1-201ENST00000423358 553 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 FABP7P2-201ENST00000429946 379 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 MTCO1P53-201ENST00000441633 699 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 OTX2P1-201ENST00000450956 354 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC108751.2-201ENST00000469993 231 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC116562.1-201ENST00000485355 781 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RN7SKP260-201ENST00000516907 149 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 MTCYBP19-201ENST00000517463 1124 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 IGLV2-28-201ENST00000520681 304 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 BUD31P1-201ENST00000521828 359 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC004825.1-201ENST00000555068 586 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RN7SL622P-201ENST00000585292 275 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC095055.1-201ENST00000603472 1113 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL450336.1-201ENST00000605180 586 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 RNU4-5P-201ENST00000607255 135 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC245100.7-201ENST00000609678 442 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL157392.4-201ENST00000609756 345 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AP000894.4-201ENST00000610185 483 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC097505.1-201ENST00000610199 565 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC087683.2-201ENST00000611384 326 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC079395.3-201ENST00000615161 484 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC009159.2-201ENST00000617603 606 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC008115.4-201ENST00000619780 775 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 Z99129.2-201ENST00000619967 314 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 UGT2B26P-201ENST00000508672 1613 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 BX005019.1-201ENST00000561881 1810 ntBASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MRPS28Q9Y2Q9 CIR1P2-201ENST00000514821 1342 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 AL133268.1-201ENST00000405676 1401 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 SPATA2P1-201ENST00000431223 2055 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 HSPD1P11-201ENST00000508643 1702 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 AC010329.2-201ENST00000595195 2737 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 SNORA66-201ENST00000384792 133 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 MT-TP-201ENST00000387461 68 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 AC093719.1-202ENST00000392735 373 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 HMGB1P10-201ENST00000395823 563 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 AL034403.1-201ENST00000399414 885 ntBASIC4.22□□□□□ -1.73
MRPS28Q9Y2Q9 CHMP1B2P-201ENST00000399581 597 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms