Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
CHRNA9Q9UGM1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CHRNA9Q9UGM1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA9Q9UGM1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHRNA9Q9UGM1 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
CHRNA9Q9UGM1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL031119.1-201ENST00000404707 1879 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RNU6-883P-201ENST00000384597 107 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RNA5SP113-201ENST00000410486 84 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RPL7P57-201ENST00000423238 740 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL645608.4-201ENST00000423619 154 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC006455.6-201ENST00000426192 893 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 MTND4LP14-201ENST00000429447 288 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RPL12P3-201ENST00000440080 396 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL162388.1-201ENST00000450912 352 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RPS3AP41-201ENST00000462701 778 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC063943.1-201ENST00000465434 453 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RPL5P30-201ENST00000465511 891 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC006511.1-201ENST00000470614 315 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC023050.1-201ENST00000498198 304 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC025459.1-201ENST00000504072 156 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 HMGB1P19-201ENST00000517578 577 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AP002812.4-201ENST00000532139 286 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 OR1F2P-201ENST00000570470 933 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 MIR3934-201ENST00000579806 107 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL512782.1-201ENST00000603093 364 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AL031320.1-201ENST00000604177 357 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 SUMO2P14-201ENST00000604488 293 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC090525.3-201ENST00000605601 189 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC116563.2-201ENST00000624751 535 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 AC139713.2-215ENST00000641428 5037 ntBASIC4.31□□□□□ -1.72
CHRNA9Q9UGM1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 DDX6P1-205ENST00000441966 1436 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 ZFRP1-201ENST00000457579 2970 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 IGKV7-3-201ENST00000357453 298 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 TRIM60P13-201ENST00000432350 1283 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 NRBF2P3-201ENST00000432731 865 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 Z80107.2-201ENST00000445127 392 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 MTND5P8-201ENST00000449817 1083 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 RPS3AP53-201ENST00000454716 778 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC091685.2-201ENST00000454924 864 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC093270.2-201ENST00000486157 792 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 NDUFA5P12-201ENST00000503796 343 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 SCARNA22-201ENST00000503991 125 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC091868.1-201ENST00000508746 304 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 BRD9P1-201ENST00000529855 560 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AP001880.2-201ENST00000538233 448 ntBASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.3□□□□□ -1.72
CHRNA9Q9UGM1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms