Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC000123.3-201ENST00000624029 4975 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 RN7SKP185-201ENST00000362813 326 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 SNORD113-6-201ENST00000363345 75 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 MIR223-201ENST00000385204 110 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 Y_RNA.578-201ENST00000390903 88 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 TRGV6-201ENST00000417928 299 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 ELOCP9-201ENST00000418624 239 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 RPA2P2-201ENST00000419698 796 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL390023.1-201ENST00000428836 262 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC096638.2-201ENST00000434965 711 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR52B5P-201ENST00000435337 951 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 NANOGP2-201ENST00000435391 727 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL359265.1-201ENST00000440296 795 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 CNOT7P2-201ENST00000441051 832 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 ATP5C1P1-201ENST00000441945 895 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR51B8P-201ENST00000449892 769 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 RPS4XP1-201ENST00000482189 787 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 RNU6-941P-201ENST00000516346 108 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR4A2P-201ENST00000527276 913 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR11H3P-201ENST00000554547 982 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC005951.1-201ENST00000576706 485 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AP000769.2-201ENST00000602344 396 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AL020997.3-201ENST00000602843 359 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC104785.1-201ENST00000603220 588 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC016877.3-201ENST00000606778 504 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 TUSC7.1-201ENST00000610969 165 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC135068.5-201ENST00000624197 983 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 OR52B5P-202ENST00000641118 1110 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.41□□□□□ -1.54
DKK3Q9UBP4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
DKK3Q9UBP4 AC021755.1-201ENST00000559747 1447 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 RNU1-149P-201ENST00000390870 161 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 PPIAP9-201ENST00000403866 498 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 RN7SKP182-201ENST00000410772 298 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL008987.1-201ENST00000415528 237 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 RPS4XP16-201ENST00000427198 791 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL050341.1-201ENST00000447743 313 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC244505.3-201ENST00000454598 187 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC079841.1-201ENST00000481228 950 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC119751.1-201ENST00000513357 765 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 MRPS33P3-201ENST00000513456 322 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 RNU5A-4P-201ENST00000516588 111 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC109635.6-201ENST00000525487 1113 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 DEFB130C-202ENST00000530001 230 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 YWHABP2-201ENST00000540201 713 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AL049870.4-201ENST00000555741 486 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC127381.1-201ENST00000555979 939 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms