Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 AC103792.1-201ENST00000603591 919 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 PRELID3BP8-201ENST00000604148 295 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 AC115286.1-201ENST00000604298 434 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 AC010200.2-201ENST00000605098 235 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 AC092266.1-201ENST00000610958 165 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 PROS2P-201ENST00000474651 1951 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 AC018628.1-201ENST00000624147 3819 ntBASIC6.73□□□□□ -1.33
CNTN3Q9P232 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNTN3Q9P232 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CNTN3Q9P232 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC024651.2-201ENST00000562480 2098 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 COX6B1P3-201ENST00000312310 260 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 Y_RNA.89-201ENST00000363031 102 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 SNORA77.2-201ENST00000408571 112 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 RPS20P15-201ENST00000412792 311 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 USP9YP20-201ENST00000419224 558 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL953862.1-201ENST00000423016 168 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 NPM1P24-201ENST00000428039 894 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL136231.1-201ENST00000429407 730 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC073464.1-201ENST00000429823 534 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 MTCYBP45-201ENST00000435243 565 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC023141.3-201ENST00000436698 278 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 LDHAP2-201ENST00000437325 985 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC002553.3-201ENST00000453002 341 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 OR52A4P-201ENST00000472867 958 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 OR5M14P-201ENST00000506803 618 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AF131216.2-201ENST00000512316 564 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 PRMT5P1-201ENST00000514351 598 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 MTND5P4-201ENST00000514978 288 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 MTCO1P35-201ENST00000515270 228 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 Y_RNA.710-201ENST00000516975 110 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 HMGB1P23-201ENST00000518743 568 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 RPA2P3-201ENST00000533268 770 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC123904.3-201ENST00000547218 814 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 MIR3189-201ENST00000578735 73 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AC005261.5-201ENST00000596280 355 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL009028.1-201ENST00000604895 802 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 RN7SL261P-201ENST00000613441 282 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL356274.1-201ENST00000617064 410 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 AL512652.1-201ENST00000619006 500 ntBASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.72□□□□□ -1.33
CNTN3Q9P232 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNTN3Q9P232 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CNTN3Q9P232 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CNTN3Q9P232 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CNTN3Q9P232 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
CNTN3Q9P232 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CNTN3Q9P232 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 AC011416.1-201ENST00000514947 1732 ntBASIC6.71□□□□□ -1.34
CNTN3Q9P232 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.71□□□□□ -1.34
CNTN3Q9P232 SNORA43.1-201ENST00000364863 140 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms