Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 MTND4LP2-201ENST00000502312 285 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 PCNAP1-201ENST00000505363 709 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC069061.3-201ENST00000582254 823 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 BMS1P7-201ENST00000602440 1052 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC008782.1-201ENST00000603386 430 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC020910.2-201ENST00000603635 610 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC005191.1-201ENST00000603950 358 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 BX322635.1-201ENST00000605804 496 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC100814.1-201ENST00000606963 623 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC019131.2-201ENST00000609071 870 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC005962.2-201ENST00000611427 652 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AL139254.3-201ENST00000641097 674 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 AC108751.5-201ENST00000492880 1336 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 CCT8P1-201ENST00000413611 1657 ntBASIC4.85□□□□□ -1.63
HPS4Q9NQG7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HPS4Q9NQG7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 OR51C1P-202ENST00000641159 1444 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AL358176.3-201ENST00000420757 454 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC023141.6-201ENST00000429418 337 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 Z95152.1-201ENST00000453556 656 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AL161747.1-201ENST00000480068 358 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 RPL36AP41-201ENST00000493820 306 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 OR4V1P-201ENST00000525394 1140 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC068446.3-201ENST00000555285 382 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AC104820.1-201ENST00000624183 307 ntBASIC4.84□□□□□ -1.63
HPS4Q9NQG7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS4Q9NQG7 AL592437.2-201ENST00000421655 2434 ntBASIC4.84□□□□□ -1.64
HPS4Q9NQG7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.84□□□□□ -1.64
HPS4Q9NQG7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HPS4Q9NQG7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HPS4Q9NQG7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 Z73965.1-201ENST00000623412 2297 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 OR52B1P-201ENST00000316506 909 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AMZ2P2-201ENST00000406819 1057 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 EIF4A1P1-201ENST00000420241 934 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 MTND2P2-201ENST00000434633 945 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 Z99127.2-201ENST00000441426 334 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 CASP3P1-201ENST00000446037 609 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 VN1R48P-201ENST00000448149 1036 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AL162591.2-201ENST00000449634 317 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC009963.2-201ENST00000453431 138 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC093166.2-201ENST00000455969 1017 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 RNU6-491P-201ENST00000516099 110 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 TOMM20P2-201ENST00000540082 421 ntBASIC4.83□□□□□ -1.64
HPS4Q9NQG7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HPS4Q9NQG7 AGGF1P9-201ENST00000561884 913 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms