Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPS4XP21-201ENST00000603814 750 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC024085.1-201ENST00000604299 432 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC234782.5-201ENST00000617723 324 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC006065.6-201ENST00000625201 545 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC099654.15-201ENST00000639802 509 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.15□□□□□ -1.43
SSU72Q9NP77 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.15□□□□□ -1.43
SSU72Q9NP77 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.15□□□□□ -1.43
SSU72Q9NP77 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SSU72Q9NP77 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SSU72Q9NP77 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SSU72Q9NP77 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RNA5SP453-201ENST00000362503 119 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 RNU6-216P-201ENST00000363282 104 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL12P23-201ENST00000405880 490 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 HMGB3P20-201ENST00000417997 600 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 SDCBPP3-201ENST00000419629 891 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL7P56-201ENST00000429441 717 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 BX276092.6-201ENST00000430476 250 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 COL11A2P1-205ENST00000441798 676 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC093019.1-201ENST00000443135 252 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 MTND6P13-201ENST00000443510 523 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 SLC31A1P1-201ENST00000451221 567 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL26P28-201ENST00000451325 435 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 BX276092.8-201ENST00000455722 250 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC022364.2-201ENST00000457963 554 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 ACTR3P3-201ENST00000480448 893 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL23AP40-201ENST00000487630 390 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL10P7-201ENST00000495649 625 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC090638.1-201ENST00000498296 909 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC111000.3-201ENST00000508057 576 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC097460.2-201ENST00000511857 741 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 LRRC34P2-201ENST00000514850 553 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPS3AP23-202ENST00000574601 686 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 MIR4685-201ENST00000578185 69 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC060780.2-201ENST00000589047 198 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC073091.2-201ENST00000603205 907 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL442067.2-201ENST00000614033 363 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 KDM5DP1-201ENST00000622542 298 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC005514.1-201ENST00000623521 208 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC027559.1-201ENST00000636288 271 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AC093311.1-201ENST00000506586 2021 ntBASIC6.14□□□□□ -1.43
SSU72Q9NP77 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SSU72Q9NP77 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SSU72Q9NP77 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSU72Q9NP77 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSU72Q9NP77 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms