Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CR383656.6-201ENST00000550518 394 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC002519.2-203ENST00000567043 837 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 FGF7P1-201ENST00000582820 288 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC011453.2-201ENST00000603737 729 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AL022154.1-201ENST00000604698 785 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC009994.1-201ENST00000606889 253 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AL136097.3-201ENST00000611097 505 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC006338.1-201ENST00000618453 749 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC106872.5-201ENST00000508856 1416 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CASC19-260ENST00000641828 2001 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC016583.1-201ENST00000624221 2431 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL359955.1-201ENST00000455242 3275 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RNU5A-6P-201ENST00000384136 116 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RNU4-31P-201ENST00000384211 141 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MIR621-201ENST00000384919 96 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 Y_RNA.582-201ENST00000391023 95 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MTCYBP36-201ENST00000404146 440 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP240-201ENST00000410583 375 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 GLRXP1-201ENST00000423261 334 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC104843.2-201ENST00000427666 297 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RPL31P54-201ENST00000429803 370 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 FTH1P16-201ENST00000435241 552 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC110602.1-201ENST00000437414 318 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL353662.1-201ENST00000439099 327 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 PCNPP2-201ENST00000441651 455 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MTATP6P30-201ENST00000443540 664 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MTCO1P48-201ENST00000448024 1096 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MTND3P10-201ENST00000450967 341 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC002553.3-201ENST00000453002 341 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL672167.3-201ENST00000465951 960 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RPS3AP17-201ENST00000472594 777 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC008628.2-201ENST00000502605 298 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC093824.1-201ENST00000508796 343 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RFPL4AP3-201ENST00000515267 345 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-416P-201ENST00000516265 103 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 RNA5SP434-201ENST00000516647 121 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 GLYCAM1-201ENST00000546596 285 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC068305.2-201ENST00000550567 1205 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 GTF2IP8-201ENST00000560687 584 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC002310.3-201ENST00000569728 723 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC068768.2-201ENST00000602352 343 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC024560.3-201ENST00000608482 349 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC104260.1-201ENST00000616660 539 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC018816.2-201ENST00000621460 353 ntBASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A2Q9H9S3 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms