Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.52□□□□□ -1.53
ABCA3Q99758 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
ABCA3Q99758 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.52□□□□□ -1.53
ABCA3Q99758 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 MIR200C-201ENST00000384980 68 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 AC096664.2-201ENST00000411843 406 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 EIF1P3-201ENST00000423841 334 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 MRPL48P1-201ENST00000445390 636 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 RPS4XP18-201ENST00000495480 763 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCA3Q99758 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.52□□□□□ -1.53
ABCA3Q99758 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.52□□□□□ -1.53
ABCA3Q99758 AL352979.3-201ENST00000553515 247 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.52□□□□□ -1.53
ABCA3Q99758 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ABCA3Q99758 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 AP001002.1-201ENST00000625148 1513 ntBASIC5.52□□□□□ -1.53
ABCA3Q99758 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ABCA3Q99758 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.52□□□□□ -1.53
ABCA3Q99758 RNA5SP399-201ENST00000364003 117 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 TRIM60P17-201ENST00000415181 719 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 PPIAP3-201ENST00000450588 505 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 PLGLA-201ENST00000465668 449 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 HPRT1P2-201ENST00000505250 544 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AC074250.1-201ENST00000511117 192 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 MIR3124-201ENST00000582636 67 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AC005520.3-201ENST00000602874 370 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 U3.45-201ENST00000607547 219 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AL442067.2-201ENST00000614033 363 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AL353726.1-201ENST00000614041 1000 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AL034408.1-202ENST00000636088 415 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCA3Q99758 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ABCA3Q99758 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AL139247.1-201ENST00000422768 325 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.51□□□□□ -1.53
ABCA3Q99758 AC027455.1-201ENST00000574104 594 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.51□□□□□ -1.53
ABCA3Q99758 ZNF415P1-201ENST00000582279 1166 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AC005255.1-201ENST00000593748 216 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 AC096553.1-201ENST00000605169 829 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 LINC00561-201ENST00000565815 2738 ntBASIC5.51□□□□□ -1.53
ABCA3Q99758 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 BCORP1-203ENST00000513194 5093 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ABCA3Q99758 RNU1-83P-201ENST00000363426 164 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 EIF4A1P1-201ENST00000420241 934 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCA3Q99758 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ABCA3Q99758 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.5□□□□□ -1.53
ABCA3Q99758 RPL7P1-201ENST00000468161 747 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 RPL7P9-201ENST00000468715 747 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 CAB39P1-201ENST00000502277 460 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.5□□□□□ -1.53
ABCA3Q99758 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCA3Q99758 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
ABCA3Q99758 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.5□□□□□ -1.53
ABCA3Q99758 ZNF962P-201ENST00000443465 3140 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ABCA3Q99758 AC073346.2-201ENST00000624724 2058 ntBASIC5.5□□□□□ -1.53
ABCA3Q99758 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ABCA3Q99758 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.49□□□□□ -1.53
ABCA3Q99758 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ABCA3Q99758 OR56B2P-201ENST00000317102 954 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 MIR133A2-201ENST00000347538 102 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ABCA3Q99758 SYF2P2-201ENST00000417620 583 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.49□□□□□ -1.53
ABCA3Q99758 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.49□□□□□ -1.53
ABCA3Q99758 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.49□□□□□ -1.53
ABCA3Q99758 FCF1P7-201ENST00000451185 558 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 RPS3AP6-201ENST00000484430 795 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.49□□□□□ -1.53
ABCA3Q99758 DUX4L52-201ENST00000549363 777 ntBASIC5.49□□□□□ -1.53
ABCA3Q99758 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms