Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC093664.1-201ENST00000511779 289 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 SCARNA24.1-201ENST00000516465 137 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RNA5SP278-201ENST00000517055 102 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 HMGB1P19-201ENST00000517578 577 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC027308.1-201ENST00000517993 110 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC015801.1-201ENST00000585651 153 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AC245052.7-201ENST00000601161 359 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 RNU6-84P-201ENST00000607737 102 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HLA-CQ95604 U6.101-201ENST00000637707 76 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
HLA-CQ95604 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.29□□□□□ -1.24
HLA-CQ95604 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-CQ95604 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HLA-CQ95604 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-CQ95604 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AP002364.1-201ENST00000623330 3386 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC127459.1-201ENST00000563129 2768 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL355974.1-201ENST00000618896 1708 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 PPIAP22-201ENST00000358455 498 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RNU6-522P-201ENST00000364497 107 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RNU6-1222P-201ENST00000384615 107 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 Y_RNA.556-201ENST00000384677 113 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 GCNT1P4-201ENST00000404096 329 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AL136131.1-201ENST00000406079 803 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RN7SKP144-201ENST00000411108 279 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RPL36P1-201ENST00000419720 225 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC007283.2-201ENST00000424739 197 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 COL11A2P1-205ENST00000441798 676 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL035666.1-201ENST00000446195 348 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AL035551.1-201ENST00000446931 348 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 SUMO1P2-201ENST00000452524 304 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 MTCO3P10-201ENST00000455912 772 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-CQ95604 RPL23AP8-201ENST00000479812 475 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC083904.1-201ENST00000487828 231 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 PABPC1P1-201ENST00000506347 591 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC024451.1-201ENST00000508013 779 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RNU6-764P-201ENST00000516396 105 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RNA5SP337-201ENST00000517007 109 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 RPL10P18-201ENST00000519384 309 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC015818.6-201ENST00000584274 634 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL109918.3-201ENST00000603072 338 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC008782.1-201ENST00000603386 430 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AL390240.1-201ENST00000612950 384 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 AC004696.1-201ENST00000614345 607 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.28□□□□□ -1.24
HLA-CQ95604 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC012618.3-205ENST00000637896 1496 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
HLA-CQ95604 AC012513.3-201ENST00000623250 2116 ntBASIC7.28□□□□□ -1.24
HLA-CQ95604 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms