Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTL9Q8NET4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RTL9Q8NET4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RTL9Q8NET4 VPS35P1-201ENST00000563400 1518 ntBASIC5.33□□□□□ -1.56
RTL9Q8NET4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTL9Q8NET4 RN7SKP74-201ENST00000362849 309 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 AL356968.2-201ENST00000412769 1257 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 RPL23AP25-201ENST00000430973 463 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 RPL35AP15-201ENST00000468042 339 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 AC090151.1-201ENST00000520784 730 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 AL352979.3-201ENST00000553515 247 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 AL356863.1-201ENST00000623378 1080 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 AC008013.2-202ENST00000637965 364 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTL9Q8NET4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTL9Q8NET4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTL9Q8NET4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 AC139713.2-215ENST00000641428 5037 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 AP001002.1-201ENST00000625148 1513 ntBASIC5.32□□□□□ -1.56
RTL9Q8NET4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RTL9Q8NET4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 TCP1P3-201ENST00000414406 1498 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 AL672167.1-205ENST00000641112 3080 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 RNA5SP36-201ENST00000410197 133 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 RN7SKP167-201ENST00000411047 285 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 CYCSP19-201ENST00000411715 316 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 AL590806.1-201ENST00000415818 853 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 TPT1P1-201ENST00000458495 518 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 RNU6-513P-201ENST00000516104 104 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 RNA5SP143-201ENST00000516936 115 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 RNU1-45P-201ENST00000517191 141 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 AC027228.2-201ENST00000567141 2154 ntBASIC5.31□□□□□ -1.56
RTL9Q8NET4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTL9Q8NET4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RTL9Q8NET4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 RNU1-20P-201ENST00000363314 162 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 RNA5SP130-201ENST00000364431 114 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 COX6B1P7-201ENST00000430845 235 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 MRPL50P1-201ENST00000431951 384 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 RPL5P32-201ENST00000454085 879 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 RPL23AP65-201ENST00000475608 468 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AL133372.1-201ENST00000493565 745 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC104164.2-201ENST00000496953 495 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 KCTD9P2-201ENST00000512203 1013 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 RNA5SP360-201ENST00000516555 118 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.3□□□□□ -1.56
RTL9Q8NET4 MIR7151-201ENST00000617477 60 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 AC112484.5-201ENST00000624189 228 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 CDRT1-208ENST00000630868 794 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 MAPK10-303ENST00000641324 3959 ntBASIC5.3□□□□□ -1.56
RTL9Q8NET4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RTL9Q8NET4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms