Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 AC006517.1-201ENST00000480485 328 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 ARL4AP1-201ENST00000503220 705 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 YPEL5P3-201ENST00000547227 352 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 AC093524.1-201ENST00000564266 1094 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 MIR432-201ENST00000606207 94 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 AC008785.1-201ENST00000624475 456 ntBASIC6.45□□□□□ -1.38
VPS8Q8N3P4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VPS8Q8N3P4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 RNA5SP283-201ENST00000365604 119 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 MT-RNR1-201ENST00000389680 954 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 AL691449.1-201ENST00000426570 421 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 RPL23AP89-201ENST00000439324 255 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 VN1R105P-201ENST00000486595 910 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 RNU7-143P-201ENST00000516781 65 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 MIR2116-201ENST00000517221 80 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VPS8Q8N3P4 AC005005.4-201ENST00000623789 16698 ntBASIC6.44□□□□□ -1.38
VPS8Q8N3P4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 RPS11P1-201ENST00000451072 473 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 RPL29P14-201ENST00000495837 428 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 AC025554.1-201ENST00000505641 188 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 MTND6P33-201ENST00000571794 183 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 AC010487.1-201ENST00000594408 1172 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 MAPK10-349ENST00000641767 3661 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 AL929601.4-201ENST00000613011 1341 ntBASIC6.43□□□□□ -1.38
VPS8Q8N3P4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VPS8Q8N3P4 HCFC2P1-201ENST00000392864 1592 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 RN7SKP280-201ENST00000364196 304 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 PGBD4P8-201ENST00000412993 562 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 KCTD10P1-201ENST00000434203 625 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 SNORA60-201ENST00000362396 134 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 OR5BE1P-201ENST00000425977 939 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AL162151.2-201ENST00000448875 158 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 RPS26P28-201ENST00000470806 348 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 OR8R1P-201ENST00000543943 764 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 MIR6868-201ENST00000611215 58 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.42□□□□□ -1.38
VPS8Q8N3P4 OR5BE1P-202ENST00000641168 1176 ntBASIC6.42□□□□□ -1.38
VPS8Q8N3P4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 MFSD8-220ENST00000641243 1422 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VPS8Q8N3P4 AL607077.1-201ENST00000401718 499 ntBASIC6.41□□□□□ -1.38
VPS8Q8N3P4 RNU4-6P-201ENST00000410804 122 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms