Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AC015982.1-201ENST00000608113 465 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AC123768.4-201ENST00000616244 701 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AC121761.2-201ENST00000617300 689 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AC127024.6-201ENST00000621598 424 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 CU639417.4-201ENST00000623928 207 ntBASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT78Q8N1N4 AL445437.1-201ENST00000623157 3087 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC107027.3-201ENST00000565095 3473 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 RNU6-1214P-201ENST00000363650 109 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 RNU6-1300P-201ENST00000391046 108 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 HNRNPDP2-201ENST00000406475 478 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 NRBF2P2-201ENST00000413087 861 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 OR6E1P-201ENST00000414424 923 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 Z93019.1-201ENST00000416450 973 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 HMGN1P36-201ENST00000446623 298 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AL445669.2-201ENST00000454425 421 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 ANKRD26P4-201ENST00000455755 950 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 MTND2P14-201ENST00000482139 351 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 RNU6-885P-201ENST00000516607 104 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AP001189.2-201ENST00000527320 189 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 NBEAP1-201ENST00000554452 979 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 GTF2IP8-201ENST00000560687 584 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 MIR7853-201ENST00000584820 132 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC021171.1-201ENST00000603137 706 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AP003392.5-201ENST00000607857 415 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC107075.1-201ENST00000613695 314 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 AC019226.2-201ENST00000625973 424 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 MTND2P41-201ENST00000637599 773 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 OR9K1P-202ENST00000641111 3217 ntBASIC5.29□□□□□ -1.56
KRT78Q8N1N4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT78Q8N1N4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 TMSB4XP4-201ENST00000323496 618 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 RNU6-146P-201ENST00000384602 108 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 ATP5F1P2-201ENST00000398143 760 ntBASIC5.28□□□□□ -1.56
KRT78Q8N1N4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.28□□□□□ -1.56
KRT78Q8N1N4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms