Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC087683.1-201ENST00000591187 441 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC011445.2-201ENST00000599274 173 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL606834.2-201ENST00000602954 668 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC018690.1-201ENST00000608144 626 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC012409.3-201ENST00000611343 981 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC015922.4-201ENST00000612568 690 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC005840.5-201ENST00000619166 599 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL049767.1-202ENST00000637826 242 ntBASIC5.3□□□□□ -1.56
VRK3Q8IV63 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.3□□□□□ -1.56
VRK3Q8IV63 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VRK3Q8IV63 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AP000473.2-201ENST00000602659 1537 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC006600.2-201ENST00000624834 2506 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 Y_RNA.41-201ENST00000362646 102 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 RNA5SP435-201ENST00000364044 108 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 Y_RNA.560-201ENST00000384689 102 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 SNORD65-201ENST00000391079 73 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 SNORA26.8-201ENST00000391306 124 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 VDAC2P1-201ENST00000399358 958 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 DEFB108C-201ENST00000400154 252 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL121776.1-201ENST00000429337 372 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 OR2B8P-201ENST00000432841 938 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 CYCSP12-201ENST00000437729 300 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL672138.1-201ENST00000450604 1015 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 SUMO2P2-201ENST00000456482 255 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 IGBP1P4-201ENST00000503202 879 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC104090.1-201ENST00000506341 1171 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 HMGB1P44-201ENST00000508597 572 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC109458.1-201ENST00000508858 316 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC106872.4-201ENST00000510050 523 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AP000873.5-201ENST00000533906 236 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC136619.2-201ENST00000563361 631 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC010487.1-201ENST00000594408 1172 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 SUMO2P14-201ENST00000604488 293 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC116651.1-201ENST00000609724 556 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC079395.2-201ENST00000610982 737 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC244107.2-201ENST00000611773 76 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 MIR6862-1-201ENST00000613016 70 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AL139418.1-201ENST00000613613 177 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 MIR6862-2-201ENST00000614755 70 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 RMST_5.1-201ENST00000618704 126 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 AP005435.3-201ENST00000531260 3198 ntBASIC5.29□□□□□ -1.56
VRK3Q8IV63 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.29□□□□□ -1.56
VRK3Q8IV63 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VRK3Q8IV63 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms