Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NHLRC1Q6VVB1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NHLRC1Q6VVB1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 SNORD56.4-201ENST00000363883 71 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 SNORA74A-201ENST00000364089 198 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ATF1P1-201ENST00000406040 927 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 RNA5SP345-201ENST00000410646 108 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 RNU4-27P-201ENST00000410889 139 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 DPPA2P3-201ENST00000411853 655 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC019070.1-201ENST00000415008 1024 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC013429.2-201ENST00000418798 781 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC092170.1-201ENST00000440211 356 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL031584.1-201ENST00000447169 754 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 RN7SL97P-201ENST00000486780 299 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ECM1P2-201ENST00000503354 1577 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC008565.1-201ENST00000509046 885 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC004980.4-201ENST00000513375 203 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ENPP7P9-201ENST00000514456 627 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 RN7SKP260-201ENST00000516907 149 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 MTND2P7-201ENST00000521337 640 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC092490.3-201ENST00000545370 572 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 HAUS8P1-201ENST00000549005 542 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 CR383656.14-201ENST00000551951 406 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 SETP1-201ENST00000556014 845 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 NTAN1P1-201ENST00000603150 646 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC005377.1-201ENST00000605126 456 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC017076.1-201ENST00000607613 578 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL163051.2-201ENST00000618976 735 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 CFTRP2-201ENST00000634304 199 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 U6.107-201ENST00000637108 79 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 SAGE2P-201ENST00000420011 2126 ntBASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NHLRC1Q6VVB1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 C4BPAP1-201ENST00000415474 1893 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 ENSAP3-201ENST00000312710 333 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 RNA5SP455-201ENST00000365190 119 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 SNORA70.10-201ENST00000384515 134 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 SNORA66-201ENST00000384792 133 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 HMGB3P18-201ENST00000406327 590 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 TMBIM7P-201ENST00000418074 855 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 AF186996.5-201ENST00000418098 904 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 OR6C64P-201ENST00000419708 825 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 UBE2D3P3-201ENST00000426992 425 ntBASIC4.41□□□□□ -1.7
NHLRC1Q6VVB1 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms