Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RN7SL517P-201ENST00000462240 305 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC090686.1-201ENST00000481577 749 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC004980.4-201ENST00000513375 203 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC022832.1-201ENST00000530718 645 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 MTCO2P15-201ENST00000532655 656 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC092490.3-201ENST00000545370 572 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 MTND4P33-201ENST00000556706 766 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC106734.1-201ENST00000568646 663 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 CYCSP40-201ENST00000575927 294 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 Z99497.2-201ENST00000603634 310 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC011939.3-201ENST00000613686 466 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC008121.2-201ENST00000614647 523 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AL022401.1-201ENST00000619498 108 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 LINC02211-204ENST00000642024 1070 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 CR382285.2-201ENST00000624662 1495 ntBASIC4.88□□□□□ -1.63
ZNF549Q6P9A3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 RNU6-1005P-201ENST00000384519 107 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 MIR1302-8-201ENST00000408342 128 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AL160175.1-201ENST00000428124 247 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 ART2BP-201ENST00000453501 499 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 MTND2P28-201ENST00000457540 1044 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 GYG1P1-201ENST00000460864 698 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 RNU6-513P-201ENST00000516104 104 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AL109653.1-201ENST00000603091 248 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC006363.1-201ENST00000603806 463 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC080013.3-201ENST00000606839 578 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC024060.1-201ENST00000607052 494 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC026585.1-201ENST00000619582 524 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 HSPA8P14-201ENST00000552265 1805 ntBASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
ZNF549Q6P9A3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.86□□□□□ -1.63
ZNF549Q6P9A3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms