Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC135352.1-201ENST00000506173 1418 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC007342.7-201ENST00000624610 2337 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 Y_RNA.279-201ENST00000364763 95 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 SNORD65-201ENST00000391079 73 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 CYCSP45-201ENST00000402289 315 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 RN7SKP121-201ENST00000410842 305 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 HMGB3P31-201ENST00000413333 595 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC069157.1-201ENST00000421749 137 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 RAB9AP5-201ENST00000437794 597 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 RAB9AP2-201ENST00000443911 597 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC239367.2-201ENST00000447309 705 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 RPL31P15-201ENST00000449770 338 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 RPS20P4-201ENST00000461659 355 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL355032.1-201ENST00000472981 438 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 RN7SL714P-201ENST00000487050 298 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 COX6B1P2-201ENST00000489624 230 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 OR7E99P-201ENST00000505750 922 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC106800.3-201ENST00000511389 308 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 KCTD9P6-201ENST00000522306 950 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC008507.3-201ENST00000585753 472 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL008723.3-201ENST00000608926 449 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL592295.2-201ENST00000612578 206 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL031658.2-201ENST00000616850 651 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL122125.1-201ENST00000616999 600 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 RMST_5.1-201ENST00000618704 126 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL359880.1-201ENST00000621879 266 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF43Q68DV7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RNF43Q68DV7 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 SAMMSON-210ENST00000641260 1308 ntBASIC6.5□□□□□ -1.37
RNF43Q68DV7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 OR4K15-201ENST00000305051 1216 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 RNA5SP346-201ENST00000363541 121 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 Y_RNA.311-201ENST00000365068 96 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 NANOGP4-201ENST00000427230 913 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 MTCO2P12-201ENST00000427426 682 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 RPL31P54-201ENST00000429803 370 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AL365184.2-201ENST00000431139 435 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms