Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 SAMMSON-226ENST00000642089 1582 ntBASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM71Q2Q1W2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MAPK10-328ENST00000641553 4009 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 GLULP6-201ENST00000399502 913 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AP000357.1-201ENST00000409926 1165 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 LINC01881-201ENST00000416103 412 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AL136231.1-201ENST00000429407 730 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MTND1P33-201ENST00000446251 917 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 EXOSC3P1-201ENST00000448649 500 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC090804.1-201ENST00000448870 490 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AL035407.2-201ENST00000454090 378 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC011005.3-201ENST00000491624 395 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC111193.1-201ENST00000504097 155 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 HMGB1P1-201ENST00000522557 636 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 DUXAP5-201ENST00000529668 529 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 NPM1P35-201ENST00000533043 868 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 OR8K4P-201ENST00000534608 872 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AL358913.1-201ENST00000554342 121 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AGGF1P5-201ENST00000567900 919 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MIR548Y-201ENST00000582739 110 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC020910.3-201ENST00000603701 874 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC073387.2-201ENST00000604797 784 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC005377.1-201ENST00000605126 456 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC011374.2-201ENST00000607135 526 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AC093673.2-201ENST00000609674 331 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 VPS35P1-201ENST00000563400 1518 ntBASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TRIM71Q2Q1W2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 SNORA2.3-201ENST00000383920 135 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AL021331.1-201ENST00000402817 582 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 HMGB3P18-201ENST00000406327 590 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 VTA1P1-201ENST00000414044 866 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 MTCO2P20-201ENST00000437339 673 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 RPS29P9-201ENST00000440360 171 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC016772.1-201ENST00000444170 1261 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AL672167.3-201ENST00000465951 960 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC006967.1-201ENST00000467608 589 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 RN7SL354P-201ENST00000469282 294 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC104687.1-201ENST00000485829 412 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 RNA5SP392-201ENST00000516905 112 ntBASIC5.52□□□□□ -1.53
TRIM71Q2Q1W2 AC091163.3-201ENST00000518269 1144 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms