Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SOX4Q06945 RNU5E-5P-201ENST00000365379 116 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 RNU6-780P-201ENST00000391030 104 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AL034403.1-201ENST00000399414 885 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 MIR1284-201ENST00000408337 120 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 RPS21P8-201ENST00000413365 247 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 SDCBPP3-201ENST00000419629 891 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 AP006222.1-205ENST00000450734 457 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 DNAJC19P8-201ENST00000452887 259 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 SETP20-201ENST00000457046 852 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.45□□□□□ -1.38
SOX4Q06945 MTCYBP43-201ENST00000513621 740 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 RNU6-430P-201ENST00000517078 107 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.45□□□□□ -1.38
SOX4Q06945 TPM3P3-201ENST00000521343 354 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 WBP1LP3-201ENST00000523033 208 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 PCNAP4-201ENST00000532690 730 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 TAS2R6P-201ENST00000605022 826 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC079228.1-201ENST00000624774 1049 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AL355480.1-201ENST00000629041 99 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 AC063952.1-203ENST00000634410 658 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 U6.107-201ENST00000637108 79 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 AC012078.1-201ENST00000405035 1646 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 DOCK11P1-201ENST00000553480 5932 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SOX4Q06945 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 AL121768.1-201ENST00000613917 2544 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SOX4Q06945 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX4Q06945 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SOX4Q06945 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX4Q06945 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX4Q06945 SNORD8-201ENST00000363915 110 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 RN7SKP292-201ENST00000365522 317 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SOX4Q06945 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SOX4Q06945 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 AL035660.1-201ENST00000422041 222 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 CLUHP1-201ENST00000435012 1190 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 AL831737.1-201ENST00000441288 271 ntBASIC6.44□□□□□ -1.38
SOX4Q06945 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX4Q06945 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX4Q06945 SDC4P-201ENST00000453285 601 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms