Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN12P56749 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN12P56749 PARP4P3-201ENST00000510265 317 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC110775.1-201ENST00000513721 462 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CLDN12P56749 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN12P56749 SOX5P1-201ENST00000524155 1127 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN12P56749 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN12P56749 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN12P56749 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN12P56749 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN12P56749 MIR4489-201ENST00000578869 62 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN12P56749 AC008536.1-201ENST00000602872 669 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC025946.2-201ENST00000603398 234 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN12P56749 AC009318.3-201ENST00000616916 503 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 MIR6853-201ENST00000619642 74 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC019278.1-201ENST00000623516 479 ntBASIC3.8□□□□□ -1.8
CLDN12P56749 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CLDN12P56749 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN12P56749 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN12P56749 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN12P56749 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN12P56749 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN12P56749 AL590240.1-201ENST00000334118 313 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MIR659-201ENST00000384963 97 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MIR765-201ENST00000390226 114 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 SNORD66.1-201ENST00000391230 76 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN12P56749 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 AL049745.1-201ENST00000433953 286 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC005154.2-201ENST00000438110 379 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 EEF1B2P5-201ENST00000444820 548 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 SUMO2P1-206ENST00000445436 284 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 AC063943.1-201ENST00000465434 453 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 RN7SL101P-201ENST00000496350 279 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN12P56749 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 HNRNPKP5-201ENST00000515300 253 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN12P56749 IGHV3-63-201ENST00000518422 341 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 IGLVIV-64-201ENST00000518581 301 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 SMARCE1P4-201ENST00000523647 241 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 OR5M7P-201ENST00000526140 972 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 DEFB109D-201ENST00000529497 240 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLDN12P56749 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN12P56749 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 MIR4310-201ENST00000582950 57 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC007423.1-201ENST00000605009 627 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AL121612.2-201ENST00000612261 482 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC078899.5-201ENST00000612475 178 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MIR4727-201ENST00000622232 55 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN12P56749 AP002799.1-201ENST00000623552 423 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN12P56749 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
CLDN12P56749 LINC01808-202ENST00000641680 1116 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 AC105074.1-201ENST00000623380 3095 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 AL590763.1-201ENST00000398297 1545 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 INTS6P1-201ENST00000504674 2530 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.79□□□□□ -1.8
CLDN12P56749 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN12P56749 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN12P56749 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN12P56749 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN12P56749 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN12P56749 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN12P56749 RNU6-1279P-201ENST00000383917 103 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 AL450992.3-201ENST00000413192 568 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 SNRPFP1-201ENST00000414761 252 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 AP001324.1-201ENST00000428553 399 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 AC073069.1-201ENST00000428657 441 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 PA2G4P6-201ENST00000438325 1197 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 MTND6P6-201ENST00000478031 263 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN12P56749 LARP7P4-201ENST00000481075 878 ntBASIC3.78□□□□□ -1.8
CLDN12P56749 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN12P56749 AC139783.2-201ENST00000504847 1145 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms