Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.02□□□□□ -1.61
VCPP55072 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.02□□□□□ -1.61
VCPP55072 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 SNORA74C-1-201ENST00000580726 201 ntBASIC5.02□□□□□ -1.61
VCPP55072 MIR3138-201ENST00000585238 82 ntBASIC5.02□□□□□ -1.61
VCPP55072 IMMP1LP1-201ENST00000605170 488 ntBASIC5.02□□□□□ -1.61
VCPP55072 FAM27B-201ENST00000610601 213 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC006133.1-201ENST00000617106 264 ntBASIC5.02□□□□□ -1.61
VCPP55072 CYP1D1P-201ENST00000416662 1433 ntBASIC5.02□□□□□ -1.61
VCPP55072 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VCPP55072 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VCPP55072 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VCPP55072 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 SMG1P6-201ENST00000532337 2930 ntBASIC5.01□□□□□ -1.61
VCPP55072 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
VCPP55072 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 RNA5SP387-201ENST00000364226 106 ntBASIC5.01□□□□□ -1.61
VCPP55072 SNORA70C-201ENST00000384538 135 ntBASIC5.01□□□□□ -1.61
VCPP55072 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.01□□□□□ -1.61
VCPP55072 NRBF2P2-201ENST00000413087 861 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.01□□□□□ -1.61
VCPP55072 AC009302.1-201ENST00000417147 390 ntBASIC5.01□□□□□ -1.61
VCPP55072 MTND4LP13-201ENST00000425022 298 ntBASIC5.01□□□□□ -1.61
VCPP55072 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 AC004938.1-201ENST00000438468 308 ntBASIC5.01□□□□□ -1.61
VCPP55072 HMGB3P9-201ENST00000441799 583 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.01□□□□□ -1.61
VCPP55072 RPS6P2-201ENST00000454208 705 ntBASIC5.01□□□□□ -1.61
VCPP55072 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.01□□□□□ -1.61
VCPP55072 SEPT7P6-201ENST00000469999 1143 ntBASIC5.01□□□□□ -1.61
VCPP55072 AP002812.1-201ENST00000495378 474 ntBASIC5.01□□□□□ -1.61
VCPP55072 RN7SL558P-201ENST00000497468 299 ntBASIC5.01□□□□□ -1.61
VCPP55072 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VCPP55072 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VCPP55072 SNORA67.7-201ENST00000516664 135 ntBASIC5.01□□□□□ -1.61
VCPP55072 IGKV2-23-201ENST00000518729 323 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.01□□□□□ -1.61
VCPP55072 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.01□□□□□ -1.61
VCPP55072 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.01□□□□□ -1.61
VCPP55072 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.01□□□□□ -1.61
VCPP55072 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.01□□□□□ -1.61
VCPP55072 AC006130.2-201ENST00000586202 326 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC011477.5-201ENST00000586571 259 ntBASIC5.01□□□□□ -1.61
VCPP55072 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.01□□□□□ -1.61
VCPP55072 AC010424.2-201ENST00000607594 443 ntBASIC5.01□□□□□ -1.61
VCPP55072 AL592494.3-201ENST00000609485 464 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC023043.4-201ENST00000612081 449 ntBASIC5.01□□□□□ -1.61
VCPP55072 AC015804.1-201ENST00000622935 435 ntBASIC5.01□□□□□ -1.61
VCPP55072 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 AC093535.2-201ENST00000624769 2326 ntBASIC5.01□□□□□ -1.61
VCPP55072 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VCPP55072 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.01□□□□□ -1.61
VCPP55072 NCLP2-201ENST00000416078 1462 ntBASIC5□□□□□ -1.61
VCPP55072 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5□□□□□ -1.61
VCPP55072 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VCPP55072 AP001273.1-201ENST00000624493 3152 ntBASIC5□□□□□ -1.61
VCPP55072 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
VCPP55072 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
VCPP55072 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
VCPP55072 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5□□□□□ -1.61
VCPP55072 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VCPP55072 RNU1-83P-201ENST00000363426 164 ntBASIC5□□□□□ -1.61
VCPP55072 RNU4-7P-201ENST00000364758 141 ntBASIC5□□□□□ -1.61
VCPP55072 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VCPP55072 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VCPP55072 AC073136.2-201ENST00000417282 849 ntBASIC5□□□□□ -1.61
VCPP55072 VN1R37P-201ENST00000419096 748 ntBASIC5□□□□□ -1.61
VCPP55072 MTND2P2-201ENST00000434633 945 ntBASIC5□□□□□ -1.61
VCPP55072 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5□□□□□ -1.61
VCPP55072 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5□□□□□ -1.61
VCPP55072 AC016831.4-201ENST00000438302 307 ntBASIC5□□□□□ -1.61
VCPP55072 HNRNPDLP3-201ENST00000456745 380 ntBASIC5□□□□□ -1.61
VCPP55072 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5□□□□□ -1.61
VCPP55072 OR52A4P-203ENST00000498233 1014 ntBASIC5□□□□□ -1.61
VCPP55072 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5□□□□□ -1.61
VCPP55072 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5□□□□□ -1.61
VCPP55072 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5□□□□□ -1.61
VCPP55072 RNU2-30P-201ENST00000516209 141 ntBASIC5□□□□□ -1.61
VCPP55072 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5□□□□□ -1.61
VCPP55072 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5□□□□□ -1.61
VCPP55072 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VCPP55072 AC022916.3-201ENST00000592961 742 ntBASIC5□□□□□ -1.61
VCPP55072 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5□□□□□ -1.61
VCPP55072 ARF4P1-201ENST00000605447 541 ntBASIC5□□□□□ -1.61
VCPP55072 AC007497.1-201ENST00000610421 561 ntBASIC5□□□□□ -1.61
VCPP55072 AC015722.2-201ENST00000622210 551 ntBASIC5□□□□□ -1.61
VCPP55072 AC015908.5-201ENST00000623289 343 ntBASIC5□□□□□ -1.61
VCPP55072 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms