Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ACLYP53396 CASC19-206ENST00000641028 1430 ntBASIC4.89□□□□□ -1.63
ACLYP53396 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ACLYP53396 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 CYCSP19-201ENST00000411715 316 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.88□□□□□ -1.63
ACLYP53396 OR8G2P-201ENST00000412796 908 ntBASIC4.88□□□□□ -1.63
ACLYP53396 SEPT7P8-201ENST00000413308 775 ntBASIC4.88□□□□□ -1.63
ACLYP53396 RPL6P29-201ENST00000414863 865 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.88□□□□□ -1.63
ACLYP53396 AC096644.3-201ENST00000416788 338 ntBASIC4.88□□□□□ -1.63
ACLYP53396 CKS1BP6-201ENST00000424932 240 ntBASIC4.88□□□□□ -1.63
ACLYP53396 RPL21P43-201ENST00000425440 472 ntBASIC4.88□□□□□ -1.63
ACLYP53396 RPL7P2-201ENST00000427639 268 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AC114495.1-201ENST00000441274 436 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.88□□□□□ -1.63
ACLYP53396 AL162151.2-201ENST00000448875 158 ntBASIC4.88□□□□□ -1.63
ACLYP53396 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.88□□□□□ -1.63
ACLYP53396 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.88□□□□□ -1.63
ACLYP53396 AL133372.1-201ENST00000493565 745 ntBASIC4.88□□□□□ -1.63
ACLYP53396 RNA5SP249-201ENST00000516127 99 ntBASIC4.88□□□□□ -1.63
ACLYP53396 RNA5SP143-201ENST00000516936 115 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 DUX4L52-201ENST00000549363 777 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AP005262.1-201ENST00000582646 997 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.88□□□□□ -1.63
ACLYP53396 AC023762.1-201ENST00000603280 584 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AC025175.1-201ENST00000606482 759 ntBASIC4.88□□□□□ -1.63
ACLYP53396 SNORA35B-201ENST00000607417 129 ntBASIC4.88□□□□□ -1.63
ACLYP53396 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.88□□□□□ -1.63
ACLYP53396 MIR6875-201ENST00000617506 72 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AC112200.1-201ENST00000625015 234 ntBASIC4.88□□□□□ -1.63
ACLYP53396 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.88□□□□□ -1.63
ACLYP53396 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
ACLYP53396 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
ACLYP53396 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ACLYP53396 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ACLYP53396 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ACLYP53396 OR51H2P-202ENST00000641424 3046 ntBASIC4.87□□□□□ -1.63
ACLYP53396 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.87□□□□□ -1.63
ACLYP53396 THAP12P8-201ENST00000447914 2115 ntBASIC4.87□□□□□ -1.63
ACLYP53396 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ACLYP53396 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.87□□□□□ -1.63
ACLYP53396 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ACLYP53396 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ACLYP53396 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ACLYP53396 AL583835.1-201ENST00000399570 407 ntBASIC4.87□□□□□ -1.63
ACLYP53396 SETP15-201ENST00000412724 337 ntBASIC4.87□□□□□ -1.63
ACLYP53396 MFSD13B-201ENST00000420133 1290 ntBASIC4.87□□□□□ -1.63
ACLYP53396 SETP10-201ENST00000424368 814 ntBASIC4.87□□□□□ -1.63
ACLYP53396 MTCO1P51-201ENST00000427672 1060 ntBASIC4.87□□□□□ -1.63
ACLYP53396 ARL4AP4-201ENST00000434170 518 ntBASIC4.87□□□□□ -1.63
ACLYP53396 VN1R34P-201ENST00000447387 883 ntBASIC4.87□□□□□ -1.63
ACLYP53396 RHEBP2-201ENST00000450289 600 ntBASIC4.87□□□□□ -1.63
ACLYP53396 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
ACLYP53396 AC079804.1-201ENST00000461922 436 ntBASIC4.87□□□□□ -1.63
ACLYP53396 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.87□□□□□ -1.63
ACLYP53396 AC105233.3-201ENST00000531125 744 ntBASIC4.87□□□□□ -1.63
ACLYP53396 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
ACLYP53396 CDRT1-208ENST00000630868 794 ntBASIC4.87□□□□□ -1.63
ACLYP53396 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
ACLYP53396 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
ACLYP53396 AC139769.1-204ENST00000472297 1931 ntBASIC4.87□□□□□ -1.63
ACLYP53396 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.87□□□□□ -1.63
ACLYP53396 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ACLYP53396 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.86□□□□□ -1.63
ACLYP53396 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-1320P-201ENST00000390838 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-1269P-201ENST00000391139 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.86□□□□□ -1.63
ACLYP53396 RN7SKP159-201ENST00000410657 292 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RN7SKP33-201ENST00000410942 340 ntBASIC4.86□□□□□ -1.63
ACLYP53396 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 MRPL50P1-201ENST00000431951 384 ntBASIC4.86□□□□□ -1.63
ACLYP53396 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.86□□□□□ -1.63
ACLYP53396 BTF3P6-201ENST00000448054 499 ntBASIC4.86□□□□□ -1.63
ACLYP53396 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ACLYP53396 TPT1P1-201ENST00000458495 518 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-599P-201ENST00000459383 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RNU6-1193P-201ENST00000459461 107 ntBASIC4.86□□□□□ -1.63
ACLYP53396 AC091959.2-201ENST00000477363 321 ntBASIC4.86□□□□□ -1.63
ACLYP53396 RN7SL812P-201ENST00000493791 279 ntBASIC4.86□□□□□ -1.63
ACLYP53396 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.86□□□□□ -1.63
ACLYP53396 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms