Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC245047.2-201ENST00000441060 530 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC016772.1-201ENST00000444170 1261 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AL672138.1-201ENST00000450604 1015 ntBASIC5.5□□□□□ -1.53
NEK3P51956 PRPF38AP1-201ENST00000451976 933 ntBASIC5.5□□□□□ -1.53
NEK3P51956 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 AC004815.1-201ENST00000484185 331 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC024558.1-201ENST00000505008 528 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC113347.3-201ENST00000509113 148 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.5□□□□□ -1.53
NEK3P51956 FTH1P11-201ENST00000517577 551 ntBASIC5.5□□□□□ -1.53
NEK3P51956 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 OR4C2P-201ENST00000530855 1064 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC126177.5-201ENST00000549599 178 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 AC006116.5-201ENST00000591936 559 ntBASIC5.5□□□□□ -1.53
NEK3P51956 BNIP3P38-201ENST00000601117 544 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 AC006363.1-201ENST00000603806 463 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC013244.1-201ENST00000604279 193 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC021749.1-201ENST00000604322 607 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 uc_338.7-201ENST00000621834 124 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC091932.2-201ENST00000623014 291 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC135068.5-201ENST00000624197 983 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AP001002.2-201ENST00000625137 386 ntBASIC5.5□□□□□ -1.53
NEK3P51956 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 AC090897.3-201ENST00000636973 1157 ntBASIC5.5□□□□□ -1.53
NEK3P51956 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.5□□□□□ -1.53
NEK3P51956 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NEK3P51956 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 RNU4-68P-201ENST00000364314 141 ntBASIC5.49□□□□□ -1.53
NEK3P51956 RNU6-906P-201ENST00000384700 70 ntBASIC5.49□□□□□ -1.53
NEK3P51956 SNORA48.4-201ENST00000391089 134 ntBASIC5.49□□□□□ -1.53
NEK3P51956 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 RPS3AP25-201ENST00000411660 793 ntBASIC5.49□□□□□ -1.53
NEK3P51956 COX5BP7-201ENST00000414780 274 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.49□□□□□ -1.53
NEK3P51956 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.49□□□□□ -1.53
NEK3P51956 TCEA1P3-201ENST00000443005 880 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 AP000797.2-201ENST00000475768 606 ntBASIC5.49□□□□□ -1.53
NEK3P51956 RN7SL799P-201ENST00000475891 298 ntBASIC5.49□□□□□ -1.53
NEK3P51956 RPS4XP1-201ENST00000482189 787 ntBASIC5.49□□□□□ -1.53
NEK3P51956 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.49□□□□□ -1.53
NEK3P51956 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
NEK3P51956 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.49□□□□□ -1.53
NEK3P51956 HMGN1P9-201ENST00000515212 298 ntBASIC5.49□□□□□ -1.53
NEK3P51956 RNU6-311P-201ENST00000516224 102 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC027308.1-201ENST00000517993 110 ntBASIC5.49□□□□□ -1.53
NEK3P51956 CDC42P3-201ENST00000518493 633 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 HMGB1P40-201ENST00000525121 540 ntBASIC5.49□□□□□ -1.53
NEK3P51956 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 AP001317.1-201ENST00000531194 960 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.49□□□□□ -1.53
NEK3P51956 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.49□□□□□ -1.53
NEK3P51956 AP005403.1-201ENST00000579720 229 ntBASIC5.49□□□□□ -1.53
NEK3P51956 MIR5708-201ENST00000579723 85 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
NEK3P51956 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.49□□□□□ -1.53
NEK3P51956 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 AC124312.6-202ENST00000623624 418 ntBASIC5.49□□□□□ -1.53
NEK3P51956 AC008993.2-201ENST00000631744 806 ntBASIC5.49□□□□□ -1.53
NEK3P51956 ZNF663P-202ENST00000641770 1131 ntBASIC5.49□□□□□ -1.53
NEK3P51956 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 AC005261.4-201ENST00000600047 1385 ntBASIC5.49□□□□□ -1.53
NEK3P51956 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
NEK3P51956 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.49□□□□□ -1.53
NEK3P51956 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.49□□□□□ -1.53
NEK3P51956 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.49□□□□□ -1.53
NEK3P51956 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NEK3P51956 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
NEK3P51956 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NEK3P51956 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms