Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL929288.2-201ENST00000446368 407 ntBASIC4.22□□□□□ -1.73
CDX1P47902 RPL7P32-201ENST00000457119 744 ntBASIC4.22□□□□□ -1.73
CDX1P47902 RN7SL172P-201ENST00000460535 303 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC073522.1-201ENST00000483312 377 ntBASIC4.22□□□□□ -1.73
CDX1P47902 UBA52P3-201ENST00000491303 382 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 AC091912.1-201ENST00000511351 248 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC021146.3-201ENST00000511911 260 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.22□□□□□ -1.73
CDX1P47902 OR4A2P-201ENST00000527276 913 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.22□□□□□ -1.73
CDX1P47902 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDX1P47902 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.22□□□□□ -1.73
CDX1P47902 AC126177.5-201ENST00000549599 178 ntBASIC4.22□□□□□ -1.73
CDX1P47902 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CDX1P47902 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDX1P47902 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDX1P47902 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CDX1P47902 OR7E18P-201ENST00000592589 702 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.22□□□□□ -1.73
CDX1P47902 AC011492.1-201ENST00000600023 315 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC069304.3-201ENST00000603938 1084 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC133552.5-201ENST00000604266 540 ntBASIC4.22□□□□□ -1.73
CDX1P47902 AC007275.1-201ENST00000621243 671 ntBASIC4.22□□□□□ -1.73
CDX1P47902 uc_338.7-201ENST00000621834 124 ntBASIC4.22□□□□□ -1.73
CDX1P47902 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
CDX1P47902 MTCO1P6-201ENST00000481192 1384 ntBASIC4.22□□□□□ -1.73
CDX1P47902 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 ASNSP1-204ENST00000641977 1664 ntBASIC4.22□□□□□ -1.73
CDX1P47902 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDX1P47902 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDX1P47902 MTND4P9-201ENST00000507819 1346 ntBASIC4.21□□□□□ -1.73
CDX1P47902 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CDX1P47902 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.21□□□□□ -1.73
CDX1P47902 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 PABPC1P6-201ENST00000445594 1829 ntBASIC4.21□□□□□ -1.74
CDX1P47902 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDX1P47902 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 OR52B1P-201ENST00000316506 909 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 MIR133B-201ENST00000362210 119 ntBASIC4.21□□□□□ -1.74
CDX1P47902 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDX1P47902 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 AC019155.1-201ENST00000382242 574 ntBASIC4.21□□□□□ -1.74
CDX1P47902 SNORA67-201ENST00000384423 137 ntBASIC4.21□□□□□ -1.74
CDX1P47902 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDX1P47902 RNA5SP339-201ENST00000390987 122 ntBASIC4.21□□□□□ -1.74
CDX1P47902 PPIAP9-201ENST00000403866 498 ntBASIC4.21□□□□□ -1.74
CDX1P47902 RNU4-34P-201ENST00000410431 124 ntBASIC4.21□□□□□ -1.74
CDX1P47902 VN1R37P-201ENST00000419096 748 ntBASIC4.21□□□□□ -1.74
CDX1P47902 PTP4A1P7-201ENST00000423476 514 ntBASIC4.21□□□□□ -1.74
CDX1P47902 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 AP001324.1-201ENST00000428553 399 ntBASIC4.21□□□□□ -1.74
CDX1P47902 RPL37P1-201ENST00000432310 284 ntBASIC4.21□□□□□ -1.74
CDX1P47902 GSTM5P1-201ENST00000434751 660 ntBASIC4.21□□□□□ -1.74
CDX1P47902 HMGB1P45-201ENST00000435986 653 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 GAPDHP25-201ENST00000447061 1001 ntBASIC4.21□□□□□ -1.74
CDX1P47902 TRY2P-201ENST00000448860 689 ntBASIC4.21□□□□□ -1.74
CDX1P47902 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.21□□□□□ -1.74
CDX1P47902 BX248409.1-201ENST00000455497 255 ntBASIC4.21□□□□□ -1.74
CDX1P47902 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 ATP5G1P3-201ENST00000463301 410 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.21□□□□□ -1.74
CDX1P47902 AC008427.1-201ENST00000503102 655 ntBASIC4.21□□□□□ -1.74
CDX1P47902 FTH1P24-201ENST00000503502 462 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC093801.2-201ENST00000503966 1050 ntBASIC4.21□□□□□ -1.74
CDX1P47902 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 PGAM1P13-201ENST00000507497 754 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.21□□□□□ -1.74
CDX1P47902 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.21□□□□□ -1.74
CDX1P47902 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.21□□□□□ -1.74
CDX1P47902 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
CDX1P47902 AC124293.1-201ENST00000530034 493 ntBASIC4.21□□□□□ -1.74
CDX1P47902 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 AC006518.2-201ENST00000542513 940 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDX1P47902 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.21□□□□□ -1.74
CDX1P47902 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.21□□□□□ -1.74
CDX1P47902 AP005403.1-201ENST00000579720 229 ntBASIC4.21□□□□□ -1.74
CDX1P47902 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.21□□□□□ -1.74
CDX1P47902 VN1R88P-201ENST00000596787 292 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.21□□□□□ -1.74
CDX1P47902 AC108738.1-201ENST00000603703 237 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC013244.1-201ENST00000604279 193 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC099785.1-201ENST00000605697 437 ntBASIC4.21□□□□□ -1.74
CDX1P47902 AC013468.1-201ENST00000608680 598 ntBASIC4.21□□□□□ -1.74
CDX1P47902 RNU6-1192P-201ENST00000612197 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms