Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 RN7SL810P-201ENST00000493031 276 ntBASIC4.68□□□□□ -1.66
RETP07949 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.68□□□□□ -1.66
RETP07949 OR8R1P-201ENST00000543943 764 ntBASIC4.68□□□□□ -1.66
RETP07949 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.68□□□□□ -1.66
RETP07949 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 HMGB3P26-201ENST00000560051 582 ntBASIC4.68□□□□□ -1.66
RETP07949 AC006133.1-201ENST00000617106 264 ntBASIC4.68□□□□□ -1.66
RETP07949 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.68□□□□□ -1.66
RETP07949 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.68□□□□□ -1.66
RETP07949 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RETP07949 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.68□□□□□ -1.66
RETP07949 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.68□□□□□ -1.66
RETP07949 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
RETP07949 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.68□□□□□ -1.66
RETP07949 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RETP07949 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.67□□□□□ -1.66
RETP07949 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 AL356489.2-201ENST00000566968 3528 ntBASIC4.67□□□□□ -1.66
RETP07949 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
RETP07949 RNU6-984P-201ENST00000363236 109 ntBASIC4.67□□□□□ -1.66
RETP07949 MIR670-201ENST00000390142 98 ntBASIC4.67□□□□□ -1.66
RETP07949 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.67□□□□□ -1.66
RETP07949 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RETP07949 AC092162.1-201ENST00000432828 434 ntBASIC4.67□□□□□ -1.66
RETP07949 OR4C10P-201ENST00000434991 931 ntBASIC4.67□□□□□ -1.66
RETP07949 AC097523.2-201ENST00000435551 652 ntBASIC4.67□□□□□ -1.66
RETP07949 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.67□□□□□ -1.66
RETP07949 ACTR3P2-201ENST00000439585 1257 ntBASIC4.67□□□□□ -1.66
RETP07949 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
RETP07949 HSFY6P-201ENST00000445573 403 ntBASIC4.67□□□□□ -1.66
RETP07949 H2AFZP5-201ENST00000446960 382 ntBASIC4.67□□□□□ -1.66
RETP07949 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.67□□□□□ -1.66
RETP07949 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.67□□□□□ -1.66
RETP07949 MTND4LP2-201ENST00000502312 285 ntBASIC4.67□□□□□ -1.66
RETP07949 HMGB3P13-201ENST00000511263 607 ntBASIC4.67□□□□□ -1.66
RETP07949 RN7SKP34-201ENST00000516142 244 ntBASIC4.67□□□□□ -1.66
RETP07949 IGLVIV-65-201ENST00000517313 360 ntBASIC4.67□□□□□ -1.66
RETP07949 IGKV2-23-201ENST00000518729 323 ntBASIC4.67□□□□□ -1.66
RETP07949 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 PSMB7P1-201ENST00000556349 514 ntBASIC4.67□□□□□ -1.66
RETP07949 MIR3158-1-201ENST00000583596 81 ntBASIC4.67□□□□□ -1.66
RETP07949 IMMP1LP1-201ENST00000605170 488 ntBASIC4.67□□□□□ -1.66
RETP07949 AL137246.1-201ENST00000607072 977 ntBASIC4.67□□□□□ -1.66
RETP07949 AL022401.1-201ENST00000619498 108 ntBASIC4.67□□□□□ -1.66
RETP07949 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
RETP07949 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RETP07949 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RETP07949 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RETP07949 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
RETP07949 AL445487.1-201ENST00000415694 1580 ntBASIC4.66□□□□□ -1.66
RETP07949 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 AC009643.2-201ENST00000603543 1448 ntBASIC4.66□□□□□ -1.66
RETP07949 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RETP07949 RPL23AP59-201ENST00000399415 461 ntBASIC4.66□□□□□ -1.66
RETP07949 U3.35-201ENST00000408405 208 ntBASIC4.66□□□□□ -1.66
RETP07949 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 AL645608.4-201ENST00000423619 154 ntBASIC4.66□□□□□ -1.66
RETP07949 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 AC011998.1-201ENST00000433403 117 ntBASIC4.66□□□□□ -1.66
RETP07949 RPS17P8-201ENST00000434525 335 ntBASIC4.66□□□□□ -1.66
RETP07949 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.66□□□□□ -1.66
RETP07949 EIF2S2P5-201ENST00000457635 968 ntBASIC4.66□□□□□ -1.66
RETP07949 RPS7P7-201ENST00000463499 571 ntBASIC4.66□□□□□ -1.66
RETP07949 UQCRHP4-201ENST00000471686 272 ntBASIC4.66□□□□□ -1.66
RETP07949 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.66□□□□□ -1.66
RETP07949 Y_RNA.719-201ENST00000517156 106 ntBASIC4.66□□□□□ -1.66
RETP07949 AC010476.1-201ENST00000519111 851 ntBASIC4.66□□□□□ -1.66
RETP07949 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.66□□□□□ -1.66
RETP07949 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.66□□□□□ -1.66
RETP07949 AC010547.7-201ENST00000570323 333 ntBASIC4.66□□□□□ -1.66
RETP07949 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 SNORA74C-1-201ENST00000580726 201 ntBASIC4.66□□□□□ -1.66
RETP07949 MIR4444-1-201ENST00000581696 74 ntBASIC4.66□□□□□ -1.66
RETP07949 MIR4444-2-201ENST00000584390 74 ntBASIC4.66□□□□□ -1.66
RETP07949 AC022916.3-201ENST00000592961 742 ntBASIC4.66□□□□□ -1.66
RETP07949 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.66□□□□□ -1.66
RETP07949 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.66□□□□□ -1.66
RETP07949 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.66□□□□□ -1.66
RETP07949 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.66□□□□□ -1.66
RETP07949 AC074029.4-201ENST00000624796 1859 ntBASIC4.66□□□□□ -1.66
RETP07949 AL929601.4-201ENST00000613011 1341 ntBASIC4.66□□□□□ -1.66
RETP07949 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RETP07949 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RETP07949 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms