Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.97□□□□□ -1.77
SPTA1P02549 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 ATP1B1P1-201ENST00000509767 915 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 AC016559.2-201ENST00000510759 359 ntBASIC3.97□□□□□ -1.77
SPTA1P02549 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.97□□□□□ -1.77
SPTA1P02549 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.97□□□□□ -1.77
SPTA1P02549 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.97□□□□□ -1.77
SPTA1P02549 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.97□□□□□ -1.77
SPTA1P02549 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SPTA1P02549 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SPTA1P02549 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SPTA1P02549 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SPTA1P02549 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SPTA1P02549 RPL12P46-201ENST00000436610 195 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 PRELID3BP6-201ENST00000503839 571 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.96□□□□□ -1.77
SPTA1P02549 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.96□□□□□ -1.77
SPTA1P02549 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.96□□□□□ -1.77
SPTA1P02549 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.96□□□□□ -1.77
SPTA1P02549 DUX4L52-201ENST00000549363 777 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 ADAD1P2-201ENST00000588476 646 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 BNIP3P10-201ENST00000605360 577 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 RNU4-89P-201ENST00000607443 133 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 MIR3651-201ENST00000630427 90 ntBASIC3.96□□□□□ -1.77
SPTA1P02549 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SPTA1P02549 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC3.96□□□□□ -1.77
SPTA1P02549 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.96□□□□□ -1.78
SPTA1P02549 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 UBBP2-201ENST00000376781 231 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SPTA1P02549 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.96□□□□□ -1.78
SPTA1P02549 RPL37P3-201ENST00000456825 293 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 RN7SL812P-201ENST00000493791 279 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.96□□□□□ -1.78
SPTA1P02549 AC024224.1-201ENST00000538284 609 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 AL445487.1-201ENST00000415694 1580 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 DDX18P6-201ENST00000450119 1997 ntBASIC3.96□□□□□ -1.78
SPTA1P02549 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SPTA1P02549 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 AL359922.3-201ENST00000624779 1670 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 AC008549.2-201ENST00000333482 706 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 RPEP2-201ENST00000432149 701 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 CYCSP43-201ENST00000438233 310 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 BX679664.2-201ENST00000439282 283 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.95□□□□□ -1.78
SPTA1P02549 DHFRP3-201ENST00000455595 559 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.95□□□□□ -1.78
SPTA1P02549 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 uc_338.13-201ENST00000618243 179 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 AP000648.2-201ENST00000624182 404 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SPTA1P02549 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 CPHL1P-201ENST00000461341 3407 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
SPTA1P02549 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.95□□□□□ -1.78
SPTA1P02549 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SPTA1P02549 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.95□□□□□ -1.78
SPTA1P02549 RNA5SP453-201ENST00000362503 119 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 MTND4LP17-201ENST00000414607 293 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 AL935212.3-201ENST00000450729 284 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 PGBD4P4-201ENST00000509673 613 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 TRMT10BP1-201ENST00000519377 943 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 OR5B10P-201ENST00000532869 642 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.95□□□□□ -1.78
SPTA1P02549 AC115621.1-201ENST00000604653 858 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 AC093388.1-201ENST00000609166 430 ntBASIC3.95□□□□□ -1.78
SPTA1P02549 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SPTA1P02549 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
SPTA1P02549 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms