Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 HPRT1P1-201ENST00000509498 657 ntBASIC4.8□□□□□ -1.64
LDLRP01130 TPT1P8-201ENST00000510120 555 ntBASIC4.8□□□□□ -1.64
LDLRP01130 MTCO3P27-201ENST00000514397 196 ntBASIC4.8□□□□□ -1.64
LDLRP01130 ENPP7P9-201ENST00000514456 627 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 SCARNA1-201ENST00000517138 166 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 AP003355.1-201ENST00000518956 587 ntBASIC4.8□□□□□ -1.64
LDLRP01130 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 AP002373.2-201ENST00000541631 1060 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 AL049830.4-201ENST00000555149 351 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.8□□□□□ -1.64
LDLRP01130 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.8□□□□□ -1.64
LDLRP01130 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LDLRP01130 NDUFB4P11-201ENST00000560510 395 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC027449.1-201ENST00000608890 407 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AP005229.2-201ENST00000609980 697 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC093799.2-201ENST00000610062 578 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AL161616.1-201ENST00000611867 286 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC068880.4-201ENST00000623082 495 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LDLRP01130 AC007342.7-201ENST00000624610 2337 ntBASIC4.8□□□□□ -1.64
LDLRP01130 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 AL450326.2-201ENST00000421913 1962 ntBASIC4.8□□□□□ -1.64
LDLRP01130 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.8□□□□□ -1.64
LDLRP01130 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
LDLRP01130 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRP01130 SPATA2P1-201ENST00000431223 2055 ntBASIC4.79□□□□□ -1.64
LDLRP01130 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 RN7SKP149-201ENST00000363008 344 ntBASIC4.79□□□□□ -1.64
LDLRP01130 RNU6-398P-201ENST00000384143 109 ntBASIC4.79□□□□□ -1.64
LDLRP01130 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDLRP01130 AL136131.1-201ENST00000406079 803 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AL034374.1-201ENST00000406329 351 ntBASIC4.79□□□□□ -1.64
LDLRP01130 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDLRP01130 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRP01130 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 MTND2P2-201ENST00000434633 945 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 PRPF38AP2-201ENST00000438179 851 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AL645931.1-201ENST00000439737 410 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 AC022431.1-201ENST00000450941 438 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC104634.1-201ENST00000452720 462 ntBASIC4.79□□□□□ -1.64
LDLRP01130 CLIC4P1-201ENST00000453177 535 ntBASIC4.79□□□□□ -1.64
LDLRP01130 OFD1P3Y-201ENST00000453312 783 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 AL445433.1-201ENST00000457507 257 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.79□□□□□ -1.64
LDLRP01130 AC021205.1-201ENST00000468797 348 ntBASIC4.79□□□□□ -1.64
LDLRP01130 RN7SL809P-201ENST00000482040 297 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC093801.2-201ENST00000503966 1050 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.79□□□□□ -1.64
LDLRP01130 C1GALT1P3-201ENST00000522049 819 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC104115.2-201ENST00000523026 687 ntBASIC4.79□□□□□ -1.64
LDLRP01130 CIR1P1-201ENST00000524055 1133 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.79□□□□□ -1.64
LDLRP01130 AC209154.1-201ENST00000582156 337 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 AC034236.3-201ENST00000605999 461 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC097505.1-201ENST00000610199 565 ntBASIC4.79□□□□□ -1.64
LDLRP01130 AC005156.1-201ENST00000613371 573 ntBASIC4.79□□□□□ -1.64
LDLRP01130 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
LDLRP01130 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDLRP01130 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LDLRP01130 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.78□□□□□ -1.64
LDLRP01130 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LDLRP01130 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms