Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL359265.1-201ENST00000440296 795 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFBP01127 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFBP01127 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFBP01127 RNU6-760P-201ENST00000516078 97 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 RNU1-6P-201ENST00000516290 144 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFBP01127 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFBP01127 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFBP01127 NDUFB4P11-201ENST00000560510 395 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.79□□□□□ -1.64
PDGFBP01127 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.79□□□□□ -1.64
PDGFBP01127 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFBP01127 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.79□□□□□ -1.64
PDGFBP01127 AC108359.1-201ENST00000616451 1211 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AC104820.1-201ENST00000624183 307 ntBASIC4.79□□□□□ -1.64
PDGFBP01127 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PDGFBP01127 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.79□□□□□ -1.64
PDGFBP01127 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PDGFBP01127 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 TLK1P1-201ENST00000456760 2440 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 RNA5SP283-201ENST00000365604 119 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDGFBP01127 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDGFBP01127 AL022722.2-201ENST00000402519 180 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 RNU6-628P-201ENST00000410675 107 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 TMSB10P2-201ENST00000416049 131 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 ACTR3P2-201ENST00000439585 1257 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PDGFBP01127 HSFY6P-201ENST00000445573 403 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 AC079168.2-201ENST00000453977 416 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFBP01127 CCDC75P1-201ENST00000469247 791 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 UQCRHP4-201ENST00000471686 272 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 AC093770.1-201ENST00000511559 571 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 AP003730.1-201ENST00000524605 285 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFBP01127 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFBP01127 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFBP01127 AC027216.1-201ENST00000577726 685 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFBP01127 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFBP01127 AL049844.2-201ENST00000604280 628 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 BNIP3P19-201ENST00000605397 577 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 AC009032.1-201ENST00000617574 431 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFBP01127 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFBP01127 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFBP01127 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.78□□□□□ -1.64
PDGFBP01127 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFBP01127 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
PDGFBP01127 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 AL627171.1-201ENST00000618845 1308 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFBP01127 AC021146.4-201ENST00000309229 279 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 RNU6-525P-201ENST00000363685 104 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 RNA5SP187-201ENST00000384400 119 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AL589655.1-201ENST00000405398 482 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 RN7SKP267-201ENST00000410381 285 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 RPL19P16-201ENST00000433839 588 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 RPS17P8-201ENST00000434525 335 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 RPL12P46-201ENST00000436610 195 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 YWHAZP2-201ENST00000440317 728 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC114878.1-201ENST00000441166 358 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC108463.1-201ENST00000450258 347 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFBP01127 OR4A2P-201ENST00000527276 913 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 AC008083.2-201ENST00000546707 476 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFBP01127 AC093249.4-201ENST00000564755 259 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC018552.3-201ENST00000567416 561 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 AC022884.3-201ENST00000579571 248 ntBASIC4.77□□□□□ -1.65
PDGFBP01127 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms